RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 OR2M3Q8NG83 312 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 OR9I1Q8NGQ6 314 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 OR5W2Q8NH69 310 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 ST8SIA1Q92185 356 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 RAB8BQ92930 207 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 TMEM18Q96B42 140 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 DDIT4LQ96D03 193 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 GIMAP5Q96F15 307 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 URB1-AS1Q96HZ7 61 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 SDF2Q99470 211 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 OR2B2Q9GZK3 357 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 NPFFR1Q9GZQ6 430 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF350Q9GZX5 532 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 LAT2Q9GZY6 243 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 CALHM2Q9HA72 323 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 EFCAB1Q9HAE3 211 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 PCDHB16Q9NRJ7 776 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 RNF7Q9UBF6 113 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 CARD8Q9Y2G2 431 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF835Q9Y2P0 537 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 SLC6A5Q9Y345 797 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 A0A087X0M5 115 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 A0A1B0GX30 115 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 PINLYPA6NC86 204 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 CFAP73A6NFT4 308 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 SLC22A20A6NK97 555 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 EEF1E1-BLOC1S5C9J1V9 151 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 F5H0A9 414 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-208ENST00000469585 HMGN4O00479 90 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 EEF1E1O43324 174 aaKnown RBP5.55□□□□□ -1.52
PTCD3-208ENST00000469585 KIAA0513O60268 411 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 FADS1O60427 444 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF354AO60765 605 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-208ENST00000469585 ZG16O60844 167 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 NME6O75414 186 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-208ENST00000469585 CLDN14O95500 239 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 ETS2P15036 469 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 CPN1P15169 458 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 ARSBP15848 533 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 CXCR1P25024 350 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 IL12AP29459 219 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 CPOXP36551 454 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 APOBEC1P41238 236 aaKnown RBP5.55□□□□□ -1.52
PTCD3-208ENST00000469585 KCNJ10P78508 379 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 CDK6Q00534 326 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 RBBP4Q09028 425 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 MERTKQ12866 999 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 SCARB2Q14108 478 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 RNPS1Q15287 305 aaKnown RBP5.55□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF141Q15928 474 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 KLHL26Q53HC5 615 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 RIPPLY2Q5TAB7 128 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 HBMQ6B0K9 141 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 C3P1Q6ZMU1 363 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 PATL1Q86TB9 770 aaKnown RBP5.55□□□□□ -1.52
PTCD3-208ENST00000469585 DOLPP1Q86YN1 238 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 CLEC4FQ8N1N0 589 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 ATP6V1C2Q8NEY4 427 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 OR4C3Q8NH37 302 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 OR52P1PQ8NH57 321 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 FAM110BQ8TC76 370 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 ZPLD1Q8TCW7 415 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 ZFP90Q8TF47 636 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 GTF2H4Q92759 462 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 PROX1Q92786 737 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 SNAPC3Q92966 411 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 CPNE4Q96A23 557 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-208ENST00000469585 TEX37Q96LM6 180 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 CGREF1Q99674 301 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 SLC39A3Q9BRY0 314 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 INPP5KQ9BT40 448 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 TAPBPLQ9BX59 468 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 UGT2B28Q9BY64 529 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 PIGMQ9H3S5 423 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 TMEM27Q9HBJ8 222 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 A4GALTQ9NPC4 353 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 EXOSC3Q9NQT5 275 aaKnown RBP5.55□□□□□ -1.52
PTCD3-208ENST00000469585 GLRX2Q9NS18 164 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 PNPLA3Q9NST1 481 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 ADPRHL2Q9NX46 363 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 EMC3Q9P0I2 261 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 NDRG3Q9UGV2 375 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 FBXL2Q9UKC9 423 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 SLC9A8Q9Y2E8 581 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 ARL2BPQ9Y2Y0 163 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 KLF2Q9Y5W3 355 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF462Q96JM2 2506 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 SVILO95425 2214 aa5.55□□□□□ -1.52
PTCD3-208ENST00000469585 ATMQ13315 3056 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 IGLV3-32A0A0A0MS00 114 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 NPIPA5A0A0B4J1W7 369 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 LOC100653049A0A140TA62 436 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 CD8B2A6NJW9 211 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 NPIPA7E9PJI5 369 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 AP3D1O14617 1153 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF195O14628 629 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 CASKO14936 926 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 KRT34O76011 436 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 EPPINO95925 133 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 TOMM40O96008 361 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms