RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 RUNDC3AQ59EK9 446 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 ZNF613Q6PF04 617 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 LRP11Q86VZ4 500 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 PTOV1Q86YD1 416 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 C11orf65Q8NCR3 313 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 ARHGDIGQ99819 225 aa18.12■□□□□ 0.49
COL9A3-207ENST00000467819 MYEF2Q9P2K5 600 aaKnown RBP18.12■□□□□ 0.49
COL9A3-207ENST00000467819 CHP2O43745 196 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 HPXP02790 462 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 SEC24CP53992 1094 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 PCBP3P57721 371 aaKnown RBP18.11■□□□□ 0.49
COL9A3-207ENST00000467819 MTPNP58546 118 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 RPS23P62266 143 aaKnown RBP18.11■□□□□ 0.49
COL9A3-207ENST00000467819 NPTX1Q15818 432 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 DUSP7Q16829 419 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 ENTPD8Q5MY95 495 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 ELFN2Q5R3F8 820 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 LIPNQ5VXI9 398 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 WDR88Q6ZMY6 472 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 RINLQ6ZS11 566 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 SLC35D2Q76EJ3 337 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 DHDDSQ86SQ9 333 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 GPR32P1Q8NGA4 272 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 OR6T1Q8NGN1 323 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 VANGL1Q8TAA9 524 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-207ENST00000467819 FGFBP3Q8TAT2 258 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 MS4A5Q9H3V2 200 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 DENND2DQ9H6A0 471 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-207ENST00000467819 NARFLQ9H6Q4 476 aa18.11■□□□□ 0.49
COL9A3-207ENST00000467819 LEF1Q9UJU2 399 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-207ENST00000467819 M0QX08 132 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 KPNA4O00629 521 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-207ENST00000467819 FMO6PO60774 539 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 CH25HO95992 272 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 C8BP07358 591 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 SELPLGQ14242 412 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 MELKQ14680 651 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 FXNQ16595 210 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 LINC00114Q6XXX2 140 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 CARM1Q86X55 608 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 RBM45Q8IUH3 476 aaKnown RBP18.1■□□□□ 0.49
COL9A3-207ENST00000467819 SKA3Q8IX90 412 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 DYDC1Q8WWB3 177 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 TMEM54Q969K7 222 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 C1orf159Q96HA4 380 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 GLTPQ9NZD2 209 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 DUSP13Q9UII6 198 aa18.1■□□□□ 0.49
COL9A3-207ENST00000467819 A0A1W2PPW3 197 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 RNF13O43567 381 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 THY1P04216 161 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 COL8A2P25067 703 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 LSP1P33241 339 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 GPR6P46095 362 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-207ENST00000467819 RBBP4Q09028 425 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 ZNF74Q16587 644 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 TTC33Q6PID6 262 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-207ENST00000467819 PIWIL3Q7Z3Z3 882 aaKnown RBP18.09■□□□□ 0.49
COL9A3-207ENST00000467819 ZNF584Q8IVC4 421 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 SLC22A24Q8N4F4 322 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 RFLNBQ8N5W9 214 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 LRRC17Q8N6Y2 441 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 OR4D11Q8NGI4 311 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 OR6X1Q8NH79 312 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 ADAMTS16Q8TE57 1224 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 THOC1Q96FV9 657 aaKnown RBP18.09■□□□□ 0.49
COL9A3-207ENST00000467819 SLC7A8Q9UHI5 535 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 FBXL3Q9UKT7 428 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 SLC7A7Q9UM01 511 aa18.09■□□□□ 0.49
COL9A3-207ENST00000467819 TCF21O43680 179 aa18.08■□□□□ 0.48
COL9A3-207ENST00000467819 LYPD3O95274 346 aa18.08■□□□□ 0.48
COL9A3-207ENST00000467819 ALKBH6Q3KRA9 238 aa18.08■□□□□ 0.48
COL9A3-207ENST00000467819 UGT2A3Q6UWM9 527 aa18.08■□□□□ 0.48
COL9A3-207ENST00000467819 TSPYL5Q86VY4 417 aaPredicted RBP18.08■□□□□ 0.48
COL9A3-207ENST00000467819 RDH5Q92781 318 aa18.08■□□□□ 0.48
COL9A3-207ENST00000467819 ZNF566Q969W8 418 aa18.08■□□□□ 0.48
COL9A3-207ENST00000467819 CGREF1Q99674 301 aa18.08■□□□□ 0.48
COL9A3-207ENST00000467819 SH3GL3Q99963 347 aa18.08■□□□□ 0.48
COL9A3-207ENST00000467819 RABEP2Q9H5N1 569 aa18.08■□□□□ 0.48
COL9A3-207ENST00000467819 NANSQ9NR45 359 aa18.08■□□□□ 0.48
COL9A3-207ENST00000467819 TAS2R5Q9NYW4 299 aa18.08■□□□□ 0.48
COL9A3-207ENST00000467819 NDUFAF1Q9Y375 327 aa18.08■□□□□ 0.48
COL9A3-207ENST00000467819 ANGPT2O15123 496 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 NCR1O76036 304 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 SERPINA5P05154 406 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 FAM157BP0CG42 384 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 OR8G3PP0DMU2 310 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 SAGP10523 405 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-207ENST00000467819 UMPSP11172 480 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 NAT2P11245 290 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 DVL1P1P54792 670 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-207ENST00000467819 ZP4Q12836 540 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 REP15Q6BDI9 236 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 LRFN4Q6PJG9 635 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 RETREG3Q86VR2 466 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 CLDND2Q8NHS1 167 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 YIPF5Q969M3 257 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 ATP6V1G3Q96LB4 118 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 OR51B6Q9H340 312 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 LPAR2Q9HBW0 351 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 ZNF275Q9NSD4 429 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms