RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 NOX4Q9NPH5 578 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 LANCL2Q9NS86 450 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 MMP17Q9ULZ9 603 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 PIGLQ9Y2B2 252 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 AKAP11Q9UKA4 1901 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 HBE1P02100 147 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 OR8G3PP0DMU2 310 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 EVI2BP34910 448 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 RAB5CP51148 216 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 NDUFA6P56556 154 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 SIX1Q15475 284 aaPredicted RBP8.04□□□□□ -1.12
HPS4-209ENST00000466781 ZNF718Q3SXZ3 478 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 FAM199XQ6PEV8 388 aaPredicted RBP8.04□□□□□ -1.12
HPS4-209ENST00000466781 APOOLQ6UXV4 268 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 ASB11Q8WXH4 323 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 FBXW5Q969U6 566 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 SLC39A9Q9NUM3 307 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 FAM96BQ9Y3D0 163 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 SCN4AP35499 1836 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 LRIT2A6NDA9 550 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 H0Y8G0 127 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 P2RY10O00398 339 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 GABRPO00591 440 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 FAPQ12884 760 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 NFATC3Q12968 1075 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 FGFBP1Q14512 234 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 KCTD11Q693B1 232 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 IDO2Q6ZQW0 420 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 OR5AS1Q8N127 324 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 OR1N1Q8NGS0 311 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 OR13C9Q8NGT0 318 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 KCNE4Q8WWG9 221 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 ZNF583Q96ND8 569 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 SLC30A3Q99726 388 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 ALG12Q9BV10 488 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 SNAPINO95295 136 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 IL2RAP01589 272 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 METTL15P1P0C7V9 234 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 OMGP23515 440 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 FCRLAQ7L513 359 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 DPPA2Q7Z7J5 298 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 MARCH3Q86UD3 253 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 OR6V1Q8N148 313 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 OR4F15Q8NGB8 312 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 KCNG3Q8TAE7 436 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 TAF1LQ8IZX4 1826 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 TRGV8A0A0C4DH27 118 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 M0QZ24 198 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 HOXC11O43248 304 aaPredicted RBP8.04□□□□□ -1.12
HPS4-209ENST00000466781 NCR1O76036 304 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 GLCEO94923 617 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 RPL35P42766 123 aaKnown RBP8.04□□□□□ -1.12
HPS4-209ENST00000466781 UBE2KP61086 200 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 GPR19Q15760 415 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 DEFB109BQ30KR1 87 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 ARHGAP11BQ3KRB8 267 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 CBLL1Q75N03 491 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 SYT9Q86SS6 491 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 WFDC8Q8IUA0 241 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 PIANPQ8IYJ0 282 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 ARRDC1-AS1Q9H2J1 176 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 GORASP2Q9H8Y8 452 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 SEMA4GQ9NTN9 838 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 PHF1O43189 567 aaPredicted RBP8.03□□□□□ -1.12
HPS4-209ENST00000466781 FOXD2O60548 495 aaPredicted RBP8.03□□□□□ -1.12
HPS4-209ENST00000466781 GPX3P22352 226 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 GIFP27352 417 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 ECI1P42126 302 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 RGRP47804 291 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 SLC35A2P78381 396 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 TSPAN31Q12999 210 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 MLLT11Q13015 90 aaPredicted RBP8.03□□□□□ -1.12
HPS4-209ENST00000466781 SNTB1Q13884 538 aaKnown RBP8.03□□□□□ -1.12
HPS4-209ENST00000466781 MBOAT2Q6ZWT7 520 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 LINC00346Q8IVM7 164 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 SLC22A24Q8N4F4 322 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 OR5D18Q8NGL1 313 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.03□□□□□ -1.12
HPS4-209ENST00000466781 ADAMTSL1Q8N6G6 1762 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 ABCD4O14678 606 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 SCGB1D1O95968 90 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 FOLR1P15328 257 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 PPT1P50897 306 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 TMEM52BQ4KMG9 183 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 PAQR9Q6ZVX9 377 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 HPSE2Q8WWQ2 592 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 KHSRPQ92945 711 aaKnown RBP eCLIP8.03□□□□□ -1.12
HPS4-209ENST00000466781 SLC35E1Q96K37 410 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 SLC22A12Q96S37 553 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 DCLRE1CQ96SD1 692 aaKnown RBP8.03□□□□□ -1.12
HPS4-209ENST00000466781 MED20Q9H944 212 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 GALNT9Q9HCQ5 603 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 HEYLQ9NQ87 328 aaPredicted RBP8.03□□□□□ -1.12
HPS4-209ENST00000466781 H3BMQ9 156 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 EDIL3O43854 480 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 FZD7O75084 574 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 SNCGO76070 127 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 NAGAP17050 411 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 SDHBP21912 280 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 TPMTP51580 245 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms