RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 GNAO1P09471 354 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 SAGP10523 405 aaPredicted RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 PRKAR1AP10644 381 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 PIPP12273 146 aaPredicted RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 CRHBPP24387 322 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 SLC15A1P46059 708 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 GPR4P46093 362 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 CENPAP49450 140 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 PCYT1AP49585 367 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 SELENOPP49908 381 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 TPD52P55327 224 aaPredicted RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 TMPRSS3P57727 454 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 GABARAPL2P60520 117 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 CSNK2A1P68400 391 aaPredicted RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 SLC35A1P78382 337 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 ARG2P78540 354 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 MYBPC1Q00872 1141 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 IL5RAQ01344 420 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 IL1RL1Q01638 556 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 PGGHGQ32M88 737 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 MS4A18Q3C1V0 323 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 CT83Q5H943 113 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 ARMC4Q5T2S8 1044 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 AADACL4Q5VUY2 407 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 NXNL2Q5VZ03 156 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 PAQR6Q6TCH4 344 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 CASP12Q6UXS9 341 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 ESPNLQ6ZVH7 1005 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 PTCHD4Q6ZW05 846 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 H1FNTQ75WM6 255 aaPredicted RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 GALNTL5Q7Z4T8 443 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 PXKQ7Z7A4 578 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 SLC22A16Q86VW1 577 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 P3H2Q8IVL5 708 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 FAM109AQ8N4B1 249 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 TMEM251Q8N6I4 163 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 FAM83FQ8NEG4 500 aaPredicted RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 OR52L1Q8NGH7 329 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 OR8D4Q8NGM9 314 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 OR4Q3Q8NH05 313 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 TMEM163Q8TC26 289 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 FNDC8Q8TC99 324 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 IPCEF1Q8WWN9 437 aaPredicted RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 ADGRG7Q96K78 797 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 SAMD8Q96LT4 415 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 CNBD2Q96M20 576 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 SIGLEC11Q96RL6 698 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 NPAS1Q99742 590 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 NAA11Q9BSU3 229 aaPredicted RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 SF3B5Q9BWJ5 86 aaKnown RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 TAPBPLQ9BX59 468 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 TTTY12Q9BZ98 90 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 PLA2G12AQ9BZM1 189 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 ADNPQ9H2P0 1102 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 TXNIPQ9H3M7 391 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 EGLN3Q9H6Z9 239 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 ZNF703Q9H7S9 590 aaPredicted RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 RNF122Q9H9V4 155 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 CCNB1IP1Q9NPC3 277 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 FKBP14Q9NWM8 211 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 CLN6Q9NWW5 311 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 ANKRD10Q9NXR5 420 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 ALKBH4Q9NXW9 302 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 SCN3BQ9NY72 215 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 HAO2Q9NYQ3 351 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 CNOT2Q9NZN8 540 aaKnown RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 BLOC1S6Q9UL45 172 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 RNF6Q9Y252 685 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 VDAC3Q9Y277 283 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 RPH3AQ9Y2J0 694 aaPredicted RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 URB1O60287 2271 aaKnown RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 CNTRLQ7Z7A1 2325 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 MPDZO75970 2070 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 A0A087WXM4 84 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 A0A1W2PNV4 684 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 IRGMA1A4Y4 181 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 EFCAB10A6NFE3 127 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 A6NL46 340 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 CLCA1A8K7I4 914 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 KDM4EB2RXH2 506 aaPredicted RBP4.89□□□□□ -1.63
VPS41-211ENST00000466017 SLC1A7O00341 560 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 TLX2O43763 284 aaPredicted RBP4.89□□□□□ -1.63
VPS41-211ENST00000466017 SOX14O95416 240 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 CLIC3O95833 236 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 IFNGP01579 166 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 LPLP06858 475 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 IGFBP1P08833 259 aaPredicted RBP4.89□□□□□ -1.63
VPS41-211ENST00000466017 RFPL3SP0C7P2 107 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 GAAP10253 952 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 CPN1P15169 458 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 CD40P25942 277 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 POU1F1P28069 291 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 GRPRP30550 384 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 AQP2P41181 271 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 RPS5P46782 204 aaKnown RBP4.89□□□□□ -1.63
VPS41-211ENST00000466017 P2RY4P51582 365 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 SLC25A1P53007 311 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 CTXN1P60606 82 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 SLC35A2P78381 396 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 SNAPC1Q16533 368 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms