RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 SLC7A7Q9UM01 511 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 CMAHPQ9Y471 501 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 SPEF1Q9Y4P9 236 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 TMEM129A0AVI4 362 aa19.66■□□□□ 0.74
PTPN4-207ENST00000460162 ENTPD5O75356 428 aa19.66■□□□□ 0.74
PTPN4-207ENST00000460162 STAMBPO95630 424 aa19.66■□□□□ 0.74
PTPN4-207ENST00000460162 DAOP14920 347 aa19.66■□□□□ 0.74
PTPN4-207ENST00000460162 PTDSS1P48651 473 aaKnown RBP19.66■□□□□ 0.74
PTPN4-207ENST00000460162 VMACQ2NL98 169 aa19.66■□□□□ 0.74
PTPN4-207ENST00000460162 SLC35D2Q76EJ3 337 aa19.66■□□□□ 0.74
PTPN4-207ENST00000460162 RBM45Q8IUH3 476 aaKnown RBP19.66■□□□□ 0.74
PTPN4-207ENST00000460162 CDK20Q8IZL9 346 aa19.66■□□□□ 0.74
PTPN4-207ENST00000460162 TMEM158Q8WZ71 300 aa19.66■□□□□ 0.74
PTPN4-207ENST00000460162 TMEM54Q969K7 222 aa19.66■□□□□ 0.74
PTPN4-207ENST00000460162 MRPL24Q96A35 216 aaKnown RBP19.66■□□□□ 0.74
PTPN4-207ENST00000460162 MSI2Q96DH6 328 aaKnown RBP19.66■□□□□ 0.74
PTPN4-207ENST00000460162 MS4A3Q96HJ5 214 aa19.66■□□□□ 0.74
PTPN4-207ENST00000460162 MRGBPQ9NV56 204 aa19.66■□□□□ 0.74
PTPN4-207ENST00000460162 ARGLU1Q9NWB6 273 aaPredicted RBP19.66■□□□□ 0.74
PTPN4-207ENST00000460162 LOC100289279A0A1B0GTE1 492 aa19.65■□□□□ 0.74
PTPN4-207ENST00000460162 CH25HO95992 272 aa19.65■□□□□ 0.74
PTPN4-207ENST00000460162 ZNF35P13682 527 aa19.65■□□□□ 0.74
PTPN4-207ENST00000460162 GIPRP48546 466 aa19.65■□□□□ 0.74
PTPN4-207ENST00000460162 EVX1P49640 407 aa19.65■□□□□ 0.74
PTPN4-207ENST00000460162 RPS23P62266 143 aaKnown RBP19.65■□□□□ 0.74
PTPN4-207ENST00000460162 PIGFQ07326 219 aa19.65■□□□□ 0.74
PTPN4-207ENST00000460162 CCDC80Q76M96 950 aa19.65■□□□□ 0.74
PTPN4-207ENST00000460162 PIWIL3Q7Z3Z3 882 aaKnown RBP19.65■□□□□ 0.74
PTPN4-207ENST00000460162 TSPYL5Q86VY4 417 aaPredicted RBP19.65■□□□□ 0.74
PTPN4-207ENST00000460162 ZNF566Q969W8 418 aa19.65■□□□□ 0.74
PTPN4-207ENST00000460162 TAS2R5Q9NYW4 299 aa19.65■□□□□ 0.74
PTPN4-207ENST00000460162 GLTPQ9NZD2 209 aa19.65■□□□□ 0.74
PTPN4-207ENST00000460162 KPNA4O00629 521 aaPredicted RBP19.64■□□□□ 0.73
PTPN4-207ENST00000460162 PHF1O43189 567 aaPredicted RBP19.64■□□□□ 0.73
PTPN4-207ENST00000460162 IGFBP1P08833 259 aaPredicted RBP19.64■□□□□ 0.73
PTPN4-207ENST00000460162 ASAH2BP0C7U1 165 aa19.64■□□□□ 0.73
PTPN4-207ENST00000460162 GLRXP35754 106 aa19.64■□□□□ 0.73
PTPN4-207ENST00000460162 GZMMP51124 257 aa19.64■□□□□ 0.73
PTPN4-207ENST00000460162 CRYBA2P53672 197 aa19.64■□□□□ 0.73
PTPN4-207ENST00000460162 RAB1AP62820 205 aa19.64■□□□□ 0.73
PTPN4-207ENST00000460162 GALK2Q01415 458 aa19.64■□□□□ 0.73
PTPN4-207ENST00000460162 ZNF786Q8N393 782 aa19.64■□□□□ 0.73
PTPN4-207ENST00000460162 SLC25A44Q96H78 314 aaPredicted RBP19.64■□□□□ 0.73
PTPN4-207ENST00000460162 SH3GL1Q99961 368 aa19.64■□□□□ 0.73
PTPN4-207ENST00000460162 REPIN1Q9BWE0 567 aaKnown RBP19.64■□□□□ 0.73
PTPN4-207ENST00000460162 CHODLQ9H9P2 273 aa19.64■□□□□ 0.73
PTPN4-207ENST00000460162 M0R233 179 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 FBP2O00757 339 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 RNF13O43567 381 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 SYNGR3O43761 229 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 TACSTD2P09758 323 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 HNF1AP20823 631 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 LSP1P33241 339 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 THBS2P35442 1172 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 CHN2P52757 468 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 CYLC2Q14093 348 aaPredicted RBP19.63■□□□□ 0.73
PTPN4-207ENST00000460162 MELKQ14680 651 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 COQ5Q5HYK3 327 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 NANOGNBQ7Z5D8 188 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 PHC2Q8IXK0 858 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 ZCCHC24Q8N2G6 241 aaKnown RBP19.63■□□□□ 0.73
PTPN4-207ENST00000460162 ARIH2OSQ8N7S6 290 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 OR8J3Q8NGG0 315 aa19.63■□□□□ 0.73
PTPN4-207ENST00000460162 MRPL37Q9BZE1 423 aaKnown RBP19.63■□□□□ 0.73
PTPN4-207ENST00000460162 SH3PXD2BA1X283 911 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 HIST1H2ABP04908 130 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 ADRA2AP08913 450 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 PGA4P0DJD7 388 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 PGA3P0DJD8 388 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 UMPSP11172 480 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 H2AFXP16104 143 aaPredicted RBP19.62■□□□□ 0.73
PTPN4-207ENST00000460162 SRD5A1P18405 259 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 FXNQ16595 210 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 NANOGP8Q6NSW7 305 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 HIST3H2AQ7L7L0 130 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 SLC22A24Q8N4F4 322 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 LRRC17Q8N6Y2 441 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 UBASH3BQ8TF42 649 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 HPS1Q92902 700 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 HIST1H2ACQ93077 130 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 PRSS27Q9BQR3 290 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 TMEM120AQ9BXJ8 343 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 POLR2J2Q9GZM3 115 aaKnown RBP19.62■□□□□ 0.73
PTPN4-207ENST00000460162 POLR2J3Q9H1A7 115 aaKnown RBP19.62■□□□□ 0.73
PTPN4-207ENST00000460162 NANOGQ9H9S0 305 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 TMEM38BQ9NVV0 291 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 SLC7A8Q9UHI5 535 aa19.62■□□□□ 0.73
PTPN4-207ENST00000460162 SVEP1Q4LDE5 3571 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 FXYD1O00168 92 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 FARS2O95363 451 aaKnown RBP19.61■□□□□ 0.73
PTPN4-207ENST00000460162 IGHG1P01857 330 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 OR8G3PP0DMU2 310 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 MSMPQ1L6U9 139 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 NRN1LQ496H8 165 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 RABL3Q5HYI8 236 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 FAM120AOSQ5T036 256 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 GKAP1Q5VSY0 366 aaPredicted RBP19.61■□□□□ 0.73
PTPN4-207ENST00000460162 DPPA2Q7Z7J5 298 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 CALHM3Q86XJ0 350 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 SKA3Q8IX90 412 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms