RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 CXCL14O95715 111 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 IFNA4P05014 189 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 ACAA2P42765 397 aaKnown RBP12.49□□□□□ -0.41
PTPRE-204ENST00000455661 POU3F4P49335 361 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 EFNB2P52799 333 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 BLOC1S1P78537 153 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 RUNX2Q13950 521 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF234Q14588 700 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 TSC22D1Q15714 1073 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 GUCA2BQ16661 112 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 ISXQ2M1V0 245 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF528Q3MIS6 628 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 LRRC37A5PQ49AS3 106 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 DEFB134Q4QY38 66 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 LINC00114Q6XXX2 140 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 VN1R4Q7Z5H5 301 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 JAZF1Q86VZ6 243 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 C12orf40Q86WS4 652 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 CBLN2Q8IUK8 224 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF595Q8IYB9 648 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF511Q8NB15 262 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 TMEM229BQ8NBD8 167 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 INO80EQ8NBZ0 244 aaPredicted RBP12.49□□□□□ -0.41
PTPRE-204ENST00000455661 NT5CQ8TCD5 201 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 GPR148Q8TDV2 347 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 FGF13Q92913 245 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 ZBP1Q9H171 429 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 ATG5Q9H1Y0 275 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 MYOZ1Q9NP98 299 aaPredicted RBP12.49□□□□□ -0.41
PTPRE-204ENST00000455661 MRM2Q9UI43 246 aaKnown RBP12.49□□□□□ -0.41
PTPRE-204ENST00000455661 IKZF2Q9UKS7 526 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 DAPP1Q9UN19 280 aa12.49□□□□□ -0.41
PTPRE-204ENST00000455661 YBX2Q9Y2T7 364 aaKnown RBP12.49□□□□□ -0.41
PTPRE-204ENST00000455661 TRBV5-7A0A0A0MS05 114 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 SULT1C2O00338 296 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 NAT2P11245 290 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 CSRP1P21291 193 aaKnown RBP12.48□□□□□ -0.41
PTPRE-204ENST00000455661 EMDP50402 254 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 SWI5Q1ZZU3 235 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 VWA2Q5GFL6 755 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 LINC01590Q5TEZ4 76 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF550Q7Z398 422 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 GPX8Q8TED1 209 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 TIMM29Q9BSF4 260 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 TEX101Q9BY14 249 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 CAPN10Q9HC96 672 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 SLC17A5Q9NRA2 495 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 SLC27A6Q9Y2P4 619 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 URADA6NGE7 173 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 TMEM200CA6NKL6 621 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 TMEM212A6NML5 194 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 AMY2AP04746 511 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF10P21506 573 aaPredicted RBP12.48□□□□□ -0.41
PTPRE-204ENST00000455661 PPM1AP35813 382 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 AKR1C2P52895 323 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 PRPS1P60891 318 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 AKR1C1Q04828 323 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 ATXN7L3Q14CW9 347 aaPredicted RBP12.48□□□□□ -0.41
PTPRE-204ENST00000455661 EXOSC7Q15024 291 aaKnown RBP12.48□□□□□ -0.41
PTPRE-204ENST00000455661 RAB11BQ15907 218 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 C2orf76Q3KRA6 126 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 ARHGAP40Q5TG30 622 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 SLC39A5Q6ZMH5 540 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 ZAR1Q86SH2 424 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 GTPBP8Q8N3Z3 284 aaPredicted RBP12.48□□□□□ -0.41
PTPRE-204ENST00000455661 OR1J2Q8NGS2 313 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 PXYLP1Q8TE99 480 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 THRSPQ92748 146 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 HDAC8Q9BY41 377 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 DNAJB12Q9NXW2 375 aaKnown RBP12.48□□□□□ -0.41
PTPRE-204ENST00000455661 SLC22A7Q9Y694 548 aa12.48□□□□□ -0.41
PTPRE-204ENST00000455661 LOC100289279A0A1B0GTE1 492 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 RNF222A6NCQ9 220 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 NUDT19A8MXV4 375 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 LDB3O75112 727 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 ADH1CP00326 375 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 RHOP08100 348 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 SERTAD2Q14140 314 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 TCEAL5Q5H9L2 206 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 AVPI1Q5T686 147 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 C3orf33Q6P1S2 294 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 GLYATL2Q8WU03 294 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 PPP1R1CQ8WVI7 109 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 ARL11Q969Q4 196 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 FAM3DQ96BQ1 224 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 ZBTB8AQ96BR9 441 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 SEC22AQ96IW7 307 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 CNTNAP3BQ96NU0 1288 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 PHPT1Q9NRX4 125 aaPredicted RBP12.47□□□□□ -0.41
PTPRE-204ENST00000455661 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.47□□□□□ -0.41
PTPRE-204ENST00000455661 ZFP57Q9NU63 452 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 LAMP5Q9UJQ1 280 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 MKL2Q9ULH7 1088 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 HCFC2Q9Y5Z7 792 aa12.47□□□□□ -0.41
PTPRE-204ENST00000455661 OR4C45A6NMZ5 311 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 SMAD9O15198 467 aaKnown RBP12.46□□□□□ -0.41
PTPRE-204ENST00000455661 CASRP41180 1078 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 NR0B1P51843 470 aaKnown RBP12.46□□□□□ -0.41
PTPRE-204ENST00000455661 DCDP81605 110 aaKnown RBP12.46□□□□□ -0.41
PTPRE-204ENST00000455661 DHRS2Q13268 280 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms