RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 SNX33Q8WV41 574 aa6.14□□□□□ -1.43
ECHDC1-210ENST00000454859 SPRYD4Q8WW59 207 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-210ENST00000454859 SMIM19Q96E16 107 aa6.14□□□□□ -1.43
ECHDC1-210ENST00000454859 SLC25A44Q96H78 314 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-210ENST00000454859 C5orf34Q96MH7 638 aa6.14□□□□□ -1.43
ECHDC1-210ENST00000454859 WDFY2Q96P53 400 aa6.14□□□□□ -1.43
ECHDC1-210ENST00000454859 AGAP4Q96P64 663 aa6.14□□□□□ -1.43
ECHDC1-210ENST00000454859 SLIRPQ9GZT3 109 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-210ENST00000454859 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.14□□□□□ -1.43
ECHDC1-210ENST00000454859 ACKR4Q9NPB9 350 aa6.14□□□□□ -1.43
ECHDC1-210ENST00000454859 KLHL1Q9NR64 748 aa6.14□□□□□ -1.43
ECHDC1-210ENST00000454859 KNTC1P50748 2209 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 IGLV1-36A0A0B4J1U3 117 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 A0A1W2PQL4 384 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 SULT2B1O00204 365 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 NME2P1O60361 137 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 GPX5O75715 221 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 ACTL6AO96019 429 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 KRT8P05787 483 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 ALOX5APP20292 161 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 NME2P22392 152 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 P2RY4P51582 365 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 VBP1P61758 197 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 HIST3H3Q16695 136 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 NRN1LQ496H8 165 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 MZT2AQ6P582 158 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 METAP1DQ6UB28 335 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 C16orf47Q6ZP98 133 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 BCDIN3DQ7Z5W3 292 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 LHFPL3Q86UP9 236 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 GLB1L2Q8IW92 636 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 BEST3Q8N1M1 668 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 OTOSQ8NHW6 89 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 MCFD2Q8NI22 146 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 GATAD2BQ8WXI9 593 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 TM9SF4Q92544 642 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 SLC25A46Q96AG3 418 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 OTULINQ96BN8 352 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 ZNF524Q96C55 264 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 SLC25A36Q96CQ1 311 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 RASD2Q96D21 266 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 MESP1Q9BRJ9 268 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 HCAR1Q9BXC0 346 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 MRPL13Q9BYD1 178 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 RPRD1BQ9NQG5 326 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 TXNL4BQ9NX01 149 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 LRFN1Q9P244 771 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 FBXL2Q9UKC9 423 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 ADAM30Q9UKF2 790 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 VDAC3Q9Y277 283 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 UGT2A1Q9Y4X1 527 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 OR2M5A3KFT3 312 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 ISPDA4D126 451 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 OR5H15A6NDH6 313 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 TMEM212A6NML5 194 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 TTLL8A6PVC2 850 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 ZNF879B4DU55 563 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 LOC110117498-PIK3R3F6TDL0 507 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 GPR171O14626 319 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 ARHGEF9O43307 516 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 SC5DO75845 299 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 CEACAM4O75871 244 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 ADRA2AP08913 450 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 ZNF12P17014 697 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 ZNF43P17038 809 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 EIF2S3P41091 472 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 ENTPD1P49961 510 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 CAPZA1P52907 286 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 MLLT10P55197 1068 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 OR2B6P58173 313 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 B3GALT5-AS1P59052 145 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 LSM6P62312 80 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 CDK5R1Q15078 307 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 TBC1D25Q3MII6 688 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 CCDC157Q569K6 752 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 C10orf128Q5T292 105 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 TMEM225Q6GV28 225 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 UNQ9370/PRO34162Q6UXP9 181 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 FOXL2NBQ6ZUU3 175 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 OR6V1Q8N148 313 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 GALNT16Q8N428 558 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 TMEM99Q8N816 258 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 CYB561A3Q8NBI2 242 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 MDS2Q8NDY4 140 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 CPNE4Q96A23 557 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 SCMH1Q96GD3 660 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 TIMP4Q99727 224 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 CHCHD6Q9BRQ6 235 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 DCUN1D5Q9BTE7 237 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 MOB1AQ9H8S9 216 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 LAMP5Q9UJQ1 280 aa6.13□□□□□ -1.43
ECHDC1-210ENST00000454859 ZNF726A6NNF4 738 aa6.12□□□□□ -1.43
ECHDC1-210ENST00000454859 LRRN3E7EW58 273 aa6.12□□□□□ -1.43
ECHDC1-210ENST00000454859 PDCD5O14737 125 aa6.12□□□□□ -1.43
ECHDC1-210ENST00000454859 EFNA2O43921 213 aa6.12□□□□□ -1.43
ECHDC1-210ENST00000454859 GLSO94925 669 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-210ENST00000454859 APOC1P02654 83 aa6.12□□□□□ -1.43
ECHDC1-210ENST00000454859 F13BP05160 661 aa6.12□□□□□ -1.43
ECHDC1-210ENST00000454859 ZNF823P16415 610 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms