RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 ETFDHQ16134 617 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 HNRNPA1L2Q32P51 320 aaKnown RBP11.37□□□□□ -0.59
UBE3B-204ENST00000449510 SLC22A6Q4U2R8 563 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 SHISA6Q6ZSJ9 500 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 TMEM200AQ86VY9 491 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 NUDCD2Q8WVJ2 157 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 TRMT2BQ96GJ1 504 aaKnown RBP11.37□□□□□ -0.59
UBE3B-204ENST00000449510 FAM71F1Q96KD3 344 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-204ENST00000449510 SULT4A1Q9BR01 284 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 NRSN2Q9GZP1 204 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 OR5V1Q9UGF6 321 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 KIF25Q9UIL4 384 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 METTL12A8MUP2 240 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 TPT1P13693 172 aaKnown RBP11.36□□□□□ -0.59
UBE3B-204ENST00000449510 CSF2RBP32927 897 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 P2RY2P41231 377 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 REEP5Q00765 189 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 SLC36A2Q495M3 483 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 TMEM255AQ5JRV8 349 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 MANEAQ5SRI9 462 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 CST9Q5W186 159 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 OR52W1Q6IF63 320 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 SFTPA1Q8IWL2 248 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 BVESQ8NE79 360 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 OR11G2Q8NGC1 345 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 OR10AC1Q8NH08 325 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 TTC9Q92623 222 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 HAVCR1Q96D42 359 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 ICKQ9UPZ9 632 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 SDK2Q58EX2 2172 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 C7orf66A4D0T2 115 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 HOXD4P09016 255 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-204ENST00000449510 OR4E1P0C645 316 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 GAAP10253 952 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 SLC2A1P11166 492 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 GABRA1P14867 456 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 AMY2BP19961 511 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 LIMS1P48059 325 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 RIDAP52758 137 aaKnown RBP11.36□□□□□ -0.59
UBE3B-204ENST00000449510 RPS27AP62979 156 aaKnown RBP11.36□□□□□ -0.59
UBE3B-204ENST00000449510 UBA52P62987 128 aaKnown RBP11.36□□□□□ -0.59
UBE3B-204ENST00000449510 GPR18Q14330 331 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 LINC01555Q8NAE3 123 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 OR2A1Q8NGT9 310 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 SLC22A18Q96BI1 424 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 AHCYL2Q96HN2 611 aaKnown RBP11.36□□□□□ -0.59
UBE3B-204ENST00000449510 TGIF2Q9GZN2 237 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 INPP5EQ9NRR6 644 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 PRELID3BQ9Y3B1 194 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 AHCTF1Q8WYP5 2266 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 A0A087WV62 115 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 PLPP2O43688 288 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 H2BFMP0C1H6 154 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 NID1P14543 1247 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 DAOP14920 347 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 SPI1P17947 270 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 RBMXP38159 391 aaKnown RBP11.36□□□□□ -0.59
UBE3B-204ENST00000449510 NR0B1P51843 470 aaKnown RBP11.36□□□□□ -0.59
UBE3B-204ENST00000449510 PCBP4P57723 403 aaKnown RBP11.36□□□□□ -0.59
UBE3B-204ENST00000449510 TAS2R19P59542 299 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 SLC7A9P82251 487 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 ALKBH1Q13686 389 aaKnown RBP11.36□□□□□ -0.59
UBE3B-204ENST00000449510 C2orf76Q3KRA6 126 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 AWAT2Q6E213 333 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 FAM122BQ7Z309 247 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 TRAPPC6BQ86SZ2 158 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 PM20D2Q8IYS1 436 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 SLC39A11Q8N1S5 342 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 IL17RCQ8NAC3 791 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 CCL4L1Q8NHW4 92 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 NUBPLQ8TB37 319 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 SLC22A8Q8TCC7 542 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 RSRP1Q9BUV0 290 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 OR52A5Q9H2C5 316 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 VSX1Q9NZR4 365 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-204ENST00000449510 EMC3Q9P0I2 261 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 GPR34Q9UPC5 381 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 RHBDD3Q9Y3P4 386 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 B3GALT1Q9Y5Z6 326 aa11.36□□□□□ -0.59
UBE3B-204ENST00000449510 HSD11B1P28845 292 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 GDI1P31150 447 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 FXYD4P59646 89 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 KCTD18Q6PI47 426 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF679Q8IYX0 411 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 OR5T2Q8NGG2 359 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 ELP5Q8TE02 316 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 CMBLQ96DG6 245 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 KLHL15Q96M94 604 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 BCL2L10Q9HD36 194 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 NRXN2Q9P2S2 1712 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 A0A0D9SG52 128 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 EFCAB7A8K855 629 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 H3BML4 177 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 FGF17O60258 216 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 GPRIN2O60269 458 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 APODP05090 189 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 BDKRB2P30411 391 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 SNU13P55769 128 aaKnown RBP11.35□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF85Q03923 595 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 C19orf48Q6RUI8 117 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms