RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 ADAM8P78325 824 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 MYBPC1Q00872 1141 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 DGCR6Q14129 220 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 KLHL24Q6TFL4 600 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 ZNF730Q6ZMV8 503 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 TMPRSS11FQ6ZWK6 438 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 ZNF627Q7L945 461 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 WFDC11Q8NEX6 87 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 OR6N1Q8NGY5 312 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 OR52J3Q8NH60 311 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 OR51A7Q8NH64 312 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 HDAC2Q92769 488 aaKnown RBP11.56□□□□□ -0.56
LINC00399-201ENST00000439008 SLC7A6OSQ96CW6 309 aaPredicted RBP11.56□□□□□ -0.56
LINC00399-201ENST00000439008 SLC25A44Q96H78 314 aaPredicted RBP11.56□□□□□ -0.56
LINC00399-201ENST00000439008 ZNF347Q96SE7 839 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 PIP5K1AQ99755 562 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 ULBP2Q9BZM5 246 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 NDE1Q9NXR1 346 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 B3GNT2Q9NY97 397 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 GLTPQ9NZD2 209 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 ACTR3BQ9P1U1 418 aa11.56□□□□□ -0.56
LINC00399-201ENST00000439008 CRNNQ9UBG3 495 aaPredicted RBP11.56□□□□□ -0.56
LINC00399-201ENST00000439008 ATP6V1G2-DDX39BF2Z307 99 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 AKAP8O43823 692 aaKnown RBP11.55□□□□□ -0.56
LINC00399-201ENST00000439008 TRMUO75648 421 aaKnown RBP11.55□□□□□ -0.56
LINC00399-201ENST00000439008 BCL10O95999 233 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 IGLV1-44P01699 117 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 HLA-HP01893 362 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 CECR9P0C854 216 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 PATE4P0C8F1 98 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 B4GALT1P15291 398 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 CALCRP30988 508 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 OMPP47874 163 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 CDH11P55287 796 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 SH3BGRP55822 239 aaPredicted RBP11.55□□□□□ -0.56
LINC00399-201ENST00000439008 FMODQ06828 376 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 SPATS1Q496A3 300 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 FGD3Q5JSP0 725 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 TMEM108Q6UXF1 575 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 C20orf204Q6ZNR8 217 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 MDP1Q86V88 176 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 RNF113BQ8IZP6 322 aaKnown RBP11.55□□□□□ -0.56
LINC00399-201ENST00000439008 SYT14Q8NB59 555 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 SMAP2Q8WU79 429 aaPredicted RBP11.55□□□□□ -0.56
LINC00399-201ENST00000439008 FAM46AQ96IP4 442 aaKnown RBP11.55□□□□□ -0.56
LINC00399-201ENST00000439008 ADAD1Q96M93 576 aaKnown RBP11.55□□□□□ -0.56
LINC00399-201ENST00000439008 CCL19Q99731 98 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 ANKRD19PQ9H560 264 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 IL1RAPQ9NPH3 570 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 BEX4Q9NWD9 120 aaPredicted RBP11.55□□□□□ -0.56
LINC00399-201ENST00000439008 CISD1Q9NZ45 108 aaKnown RBP11.55□□□□□ -0.56
LINC00399-201ENST00000439008 ZNF346Q9UL40 294 aaKnown RBP11.55□□□□□ -0.56
LINC00399-201ENST00000439008 MOKQ9UQ07 419 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 LAMP3Q9UQV4 416 aa11.55□□□□□ -0.56
LINC00399-201ENST00000439008 MAGED1Q9Y5V3 778 aaPredicted RBP11.55□□□□□ -0.56
LINC00399-201ENST00000439008 SETD2Q9BYW2 2564 aaPredicted RBP11.54□□□□□ -0.56
LINC00399-201ENST00000439008 SH3PXD2BA1X283 911 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 EFCAB9A8MZ26 197 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 MCIDASD6RGH6 385 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 OVOL3O00110 214 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 ACOT8O14734 319 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 NDUFS7O75251 213 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 PTP4A3O75365 173 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 GMNNO75496 209 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 IGKV3-15P01624 115 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 QDPRP09417 244 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 SAGP10523 405 aaPredicted RBP11.54□□□□□ -0.56
LINC00399-201ENST00000439008 ACADSP16219 412 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 CTXN1P60606 82 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 TOP3AQ13472 1001 aaPredicted RBP11.54□□□□□ -0.56
LINC00399-201ENST00000439008 TRIM25Q14258 630 aaKnown RBP11.54□□□□□ -0.56
LINC00399-201ENST00000439008 ALG10Q5BKT4 473 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 LCN8Q6JVE9 175 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 SLC22A25Q6T423 547 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 THSD4Q6ZMP0 1018 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 ZNF813Q6ZN06 617 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 SSX8Q7RTT4 187 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 OAFQ86UD1 273 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 CYP4Z1Q86W10 505 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 ZDHHC21Q8IVQ6 265 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 SKA3Q8IX90 412 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 NOXO1Q8NFA2 376 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 OR4K5Q8NGD3 323 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 ZNF519Q8TB69 540 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 FBXW5Q969U6 566 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 MCHR2Q969V1 340 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 ZNF566Q969W8 418 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 SLC38A2Q96QD8 506 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 TSPAN32Q96QS1 320 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 KCNK17Q96T54 332 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 FOXB1Q99853 325 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 C1orf21Q9H246 121 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 TXNIPQ9H3M7 391 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 OBP2BQ9NPH6 170 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 VNN3Q9NY84 501 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 SIGLEC7Q9Y286 467 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 ADAM18Q9Y3Q7 739 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 UGT2A1Q9Y4X1 527 aa11.54□□□□□ -0.56
LINC00399-201ENST00000439008 A0A1W2PRG6 482 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms