RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 NANOGP8Q6NSW7 305 aa17.34■□□□□ 0.37
HLA-B-250ENST00000434333 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.34■□□□□ 0.37
HLA-B-250ENST00000434333 TTC33Q6PID6 262 aaPredicted RBP17.34■□□□□ 0.37
HLA-B-250ENST00000434333 FBN3Q75N90 2809 aa17.34■□□□□ 0.37
HLA-B-250ENST00000434333 SLC35D2Q76EJ3 337 aa17.34■□□□□ 0.37
HLA-B-250ENST00000434333 CALHM3Q86XJ0 350 aa17.34■□□□□ 0.37
HLA-B-250ENST00000434333 PHC2Q8IXK0 858 aa17.34■□□□□ 0.37
HLA-B-250ENST00000434333 NEU4Q8WWR8 484 aaPredicted RBP17.34■□□□□ 0.37
HLA-B-250ENST00000434333 MPP4Q96JB8 637 aa17.34■□□□□ 0.37
HLA-B-250ENST00000434333 NANOGQ9H9S0 305 aa17.34■□□□□ 0.37
HLA-B-250ENST00000434333 MEPEQ9NQ76 525 aaPredicted RBP17.34■□□□□ 0.37
HLA-B-250ENST00000434333 GLTPQ9NZD2 209 aa17.34■□□□□ 0.37
HLA-B-250ENST00000434333 LPAR3Q9UBY5 353 aa17.34■□□□□ 0.37
HLA-B-250ENST00000434333 STAB1Q9NY15 2570 aa17.34■□□□□ 0.37
HLA-B-250ENST00000434333 SH3PXD2BA1X283 911 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 RNF212BA8MTL3 300 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 VSTM5A8MXK1 200 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 KPNA4O00629 521 aaPredicted RBP17.33■□□□□ 0.36
HLA-B-250ENST00000434333 SASH3O75995 380 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 DAOP14920 347 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 ZNF23P17027 643 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 GIPRP48546 466 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 PTDSS1P48651 473 aaKnown RBP17.33■□□□□ 0.36
HLA-B-250ENST00000434333 RAB1AP62820 205 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 MELKQ14680 651 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 RABL3Q5HYI8 236 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 FAM166AQ6J272 317 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 SNX32Q86XE0 403 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 ZNF584Q8IVC4 421 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 SKA3Q8IX90 412 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 MRPL24Q96A35 216 aaKnown RBP17.33■□□□□ 0.36
HLA-B-250ENST00000434333 TMEM120AQ9BXJ8 343 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 BEX2Q9BXY8 128 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 MRPL37Q9BZE1 423 aaKnown RBP17.33■□□□□ 0.36
HLA-B-250ENST00000434333 SLC19A3Q9BZV2 496 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 NANSQ9NR45 359 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 ZNF229Q9UJW7 825 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 CMAHPQ9Y471 501 aa17.33■□□□□ 0.36
HLA-B-250ENST00000434333 OR6A2O95222 327 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 PATE4P0C8F1 98 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 PGA4P0DJD7 388 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 PGA3P0DJD8 388 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 FXNQ16595 210 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 LRFN4Q6PJG9 635 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 PIWIL3Q7Z3Z3 882 aaKnown RBP17.32■□□□□ 0.36
HLA-B-250ENST00000434333 ZNF786Q8N393 782 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 ZNF540Q8NDQ6 660 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 SLC26A7Q8TE54 656 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 SLC25A44Q96H78 314 aaPredicted RBP17.32■□□□□ 0.36
HLA-B-250ENST00000434333 SHARPINQ9H0F6 387 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 DENND2DQ9H6A0 471 aaPredicted RBP17.32■□□□□ 0.36
HLA-B-250ENST00000434333 CHODLQ9H9P2 273 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 DYNLRB1Q9NP97 96 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 KCNS2Q9ULS6 477 aa17.32■□□□□ 0.36
HLA-B-250ENST00000434333 LOC100289279A0A1B0GTE1 492 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 LRP5LA4QPB2 252 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 PHF1O43189 567 aaPredicted RBP17.31■□□□□ 0.36
HLA-B-250ENST00000434333 RNF13O43567 381 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 LILRA1O75019 489 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 UBL3O95164 117 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 ADRA2AP08913 450 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 TACSTD2P09758 323 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 TNFRSF1BP20333 461 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 GLRXP35754 106 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 EVX1P49640 407 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 RAB39AQ14964 217 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 IQCCQ4KMZ1 466 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 CARM1Q86X55 608 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 SLC22A24Q8N4F4 322 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 RASSF5Q8WWW0 418 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 ZNF566Q969W8 418 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 LRRC58Q96CX6 371 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 TPK1Q9H3S4 243 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 TMEM38BQ9NVV0 291 aa17.31■□□□□ 0.36
HLA-B-250ENST00000434333 DHHO43323 396 aa17.3■□□□□ 0.36
HLA-B-250ENST00000434333 RAB36O95755 333 aa17.3■□□□□ 0.36
HLA-B-250ENST00000434333 IL2RGP31785 369 aa17.3■□□□□ 0.36
HLA-B-250ENST00000434333 UGT2B15P54855 530 aa17.3■□□□□ 0.36
HLA-B-250ENST00000434333 RIN1Q13671 783 aa17.3■□□□□ 0.36
HLA-B-250ENST00000434333 CYLC2Q14093 348 aaPredicted RBP17.3■□□□□ 0.36
HLA-B-250ENST00000434333 CGB2Q6NT52 195 aa17.3■□□□□ 0.36
HLA-B-250ENST00000434333 IL17RELQ6ZVW7 336 aa17.3■□□□□ 0.36
HLA-B-250ENST00000434333 NKAIN4Q8IVV8 208 aa17.3■□□□□ 0.36
HLA-B-250ENST00000434333 OR8J3Q8NGG0 315 aa17.3■□□□□ 0.36
HLA-B-250ENST00000434333 SH3GLB1Q9Y371 365 aa17.3■□□□□ 0.36
HLA-B-250ENST00000434333 LYNX1G3V0Z9 82 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 SYNGR3O43761 229 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 MT-ND1P03886 318 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 SERPINA5P05154 406 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 ERCC1P07992 297 aaPredicted RBP17.29■□□□□ 0.36
HLA-B-250ENST00000434333 LYNX1P0DP58 116 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 UMPSP11172 480 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 RUNX1T1Q06455 604 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 KLF10Q13118 480 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 HIST3H3Q16695 136 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 COQ5Q5HYK3 327 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 FAM120AOSQ5T036 256 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 REP15Q6BDI9 236 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 NANOGNBQ7Z5D8 188 aa17.29■□□□□ 0.36
HLA-B-250ENST00000434333 LRP11Q86VZ4 500 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms