RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 GALNT16Q8N428 558 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 C10orf53Q8N6V4 93 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 OR6S1Q8NH40 331 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 PHOSPHO1Q8TCT1 267 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ARL11Q969Q4 196 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 DNAJA3Q96EY1 480 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 MRPL48Q96GC5 212 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 GPR34Q9UPC5 381 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 COL4A3Q01955 1670 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 TET1Q8NFU7 2136 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 RNF222A6NCQ9 220 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 ELOA3DA6NLF2 546 aaPredicted RBP10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 BLOC1S5-TXNDC5H3BN57 136 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 CCL16O15467 120 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 ALOX12BO75342 701 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 DBIP07108 87 aaKnown RBP10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 NID1P14543 1247 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 PGAM2P15259 253 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 SPI1P17947 270 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 CASRP41180 1078 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 DIO1P49895 249 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 ELOA3BQ3SY89 546 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 C3orf33Q6P1S2 294 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 ETV3LQ6ZN32 361 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 SHISA5Q8N114 240 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 ELOA3Q8NG57 546 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 TSEN15Q8WW01 171 aaKnown RBP10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF764Q96H86 408 aaPredicted RBP10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF285Q96NJ3 590 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 SELENOIQ9C0D9 397 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 RPH3AQ9Y2J0 694 aaPredicted RBP10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 ANAPC1Q9H1A4 1944 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 CPED1A4D0V7 1026 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 HOXA2O43364 376 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 LDB3O75112 727 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 DNAJB6O75190 326 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 DDX6P26196 483 aaKnown RBP eCLIP10.53□□□□□ -0.722e-36■■■□□ 18.4
HMGCS1-202ENST00000433297 GABRA3P34903 492 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 PBX2P40425 430 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 SNRPNP63162 240 aaKnown RBP10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 CAP1Q01518 475 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 SREBF2Q12772 1141 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 ARHGAP19Q14CB8 494 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 EXOSC7Q15024 291 aaKnown RBP10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 MICBQ29980 383 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 NKAIN2Q5VXU1 208 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 LEG1Q6P5S2 330 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.53□□□□□ -0.721e-9■■■■□ 19.7
HMGCS1-202ENST00000433297 FAM219AQ8IW50 185 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 STOML3Q8TAV4 291 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 C14orf79Q96F83 325 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 MRGPRX3Q96LB0 322 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 PRMT8Q9NR22 394 aaPredicted RBP10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 SPHK2Q9NRA0 654 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 RXFP3Q9NSD7 469 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 FRRS1LQ9P0K9 344 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 GRXCR1A8MXD5 290 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 NDUFB2O95178 105 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 PNLIPRP2P54317 469 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 NR0B2Q15466 257 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 C2orf76Q3KRA6 126 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 DEFB134Q4QY38 66 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 NKAPLQ5M9Q1 402 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 TMEM205Q6UW68 189 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 ZAR1Q86SH2 424 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 OR4K14Q8NGD5 310 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 NUBPLQ8TB37 319 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 PHYHIPQ92561 330 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 INSM2Q96T92 566 aaPredicted RBP10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 MFRPQ9BY79 579 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 POTEKPQ9BYX7 375 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 SFXN1Q9H9B4 322 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 FLRT3Q9NZU0 649 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 OR1A2Q9Y585 309 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 ETV7Q9Y603 341 aa10.53□□□□□ -0.72
HMGCS1-202ENST00000433297 RAB33AQ14088 237 aa10.52□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF761Q86XN6 746 aaPredicted RBP10.52□□□□□ -0.72
HMGCS1-202ENST00000433297 TCEAL8Q8IYN2 117 aa10.52□□□□□ -0.72
HMGCS1-202ENST00000433297 BPIFB2Q8N4F0 458 aa10.52□□□□□ -0.72
HMGCS1-202ENST00000433297 PLPP7Q8NBV4 271 aa10.52□□□□□ -0.72
HMGCS1-202ENST00000433297 OR4S1Q8NGB4 309 aa10.52□□□□□ -0.72
HMGCS1-202ENST00000433297 OR4E2Q8NGC2 313 aa10.52□□□□□ -0.72
HMGCS1-202ENST00000433297 OR5M8Q8NGP6 311 aa10.52□□□□□ -0.72
HMGCS1-202ENST00000433297 UQCC1Q9NVA1 299 aa10.52□□□□□ -0.72
HMGCS1-202ENST00000433297 C1orf196B1AJZ1 125 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 H7C1C5 153 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF208O43345 1280 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 CCKBRP32239 447 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 LCN6P62502 163 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 ALKBH1Q13686 389 aaKnown RBP10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 GAS6Q14393 721 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 INPP5JQ15735 1006 aaPredicted RBP10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 EIF2S3LQ2VIR3 472 aaKnown RBP10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 DCUN1D4Q92564 292 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 RELTQ969Z4 430 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 ARRDC3Q96B67 414 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 LINC00615Q96LM1 132 aaPredicted RBP10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 RSRP1Q9BUV0 290 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 ALG12Q9BV10 488 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 LYPD3O95274 346 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms