RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CCDC182A6NF36 153 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 SMAD9O15198 467 aaKnown RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 TRAF3IP2O43734 574 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 MT-ND2P03891 347 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 STSP08842 583 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 RPL5P46777 297 aaKnown RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 C1DQ13901 141 aaKnown RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 MELKQ14680 651 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 KLHL12Q53G59 568 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 KCTD8Q6ZWB6 473 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 GPAT4Q86UL3 456 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 ZPLD1Q8TCW7 415 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 KISS1RQ969F8 398 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 LGALS12Q96DT0 336 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 TMEM80Q96HE8 168 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 TEAD3Q99594 435 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 EXO5Q9H790 373 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 FGF20Q9NP95 211 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 ZNF71Q9NQZ8 489 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 VSX1Q9NZR4 365 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 TP53TG5Q9Y2B4 290 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 A0A1B0GVC2 190 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 AHCYL1O43865 530 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 RAMP1O60894 148 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 CLUP10909 449 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 CPN1P15169 458 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 SPI1P17947 270 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 KLK2P20151 261 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 RPS7P62081 194 aaKnown RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 MVKQ03426 396 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 LCN1P1Q5VSP4 162 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 OR9Q1Q8NGQ5 310 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 OR2T4Q8NH00 348 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 C9orf43Q8TAL5 461 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 UCN2Q96RP3 112 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 CDCA4Q9BXL8 241 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 RPRD1BQ9NQG5 326 aaKnown RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 ASB6Q9NWX5 421 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 DIMT1Q9UNQ2 313 aaKnown RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 MOKQ9UQ07 419 aa16.26■□□□□ 0.19
HMGN1-206ENST00000431390 EXOGQ9Y2C4 368 aaKnown RBP16.26■□□□□ 0.19
HMGN1-206ENST00000431390 NBASA2RRP1 2371 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 IGHV3-15A0A0B4J1V0 119 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 CLEC18AA5D8T8 446 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 RAB36O95755 333 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 FADS2O95864 444 aaKnown RBP16.25■□□□□ 0.19
HMGN1-206ENST00000431390 JUNBP17275 347 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-206ENST00000431390 PCMT1P22061 227 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 DCKP27707 260 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 C21orf33P30042 268 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-206ENST00000431390 POU4F2Q12837 409 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 SLC17A1Q14916 467 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 PON3Q15166 354 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 RNLSQ5VYX0 342 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 GTF2IRD2BQ6EKJ0 949 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 ABLIM2Q6H8Q1 611 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 CLEC18BQ6UXF7 455 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 GTF2IRD2Q86UP8 949 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 CLEC18CQ8NCF0 446 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 OR52I1Q8NGK6 324 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 ADAD1Q96M93 576 aaKnown RBP16.25■□□□□ 0.19
HMGN1-206ENST00000431390 TAAR6Q96RI8 345 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 KCNK17Q96T54 332 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 TIMP4Q99727 224 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 TSPAN10Q9H1Z9 355 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-206ENST00000431390 PLSCR2Q9NRY7 297 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 MED29Q9NX70 200 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 SPRR3Q9UBC9 169 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 FKBP7Q9Y680 259 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 ZNF407Q9C0G0 2248 aa16.25■□□□□ 0.19
HMGN1-206ENST00000431390 DNAJC13O75165 2243 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 NPIPA2E9PIF3 369 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 NPIPA3F8WFD2 350 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 GLCEO94923 617 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 GYPBP06028 91 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 GSTT1P30711 240 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 ALDH3B2P48448 385 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 SLC16A1P53985 500 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 BIDP55957 195 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 EMX1Q04741 257 aaPredicted RBP16.24■□□□□ 0.19
HMGN1-206ENST00000431390 GGTLC2Q14390 218 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 IRF3Q14653 427 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 TBCEQ15813 527 aaPredicted RBP16.24■□□□□ 0.19
HMGN1-206ENST00000431390 B3GNT6Q6ZMB0 384 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 SIAH3Q8IW03 269 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 PM20D2Q8IYS1 436 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 GHDCQ8N2G8 530 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 OR9K2Q8NGE7 335 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 OR6X1Q8NH79 312 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 TXNDC15Q96J42 360 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 ALG12Q9BV10 488 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 SYT4Q9H2B2 425 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 KLHL13Q9P2N7 655 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 COMMD3-BMI1R4GMX3 469 aa16.24■□□□□ 0.19
HMGN1-206ENST00000431390 SLC22A23A1A5C7 686 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 CENPBD1B2RD01 187 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 H7C1C5 153 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 AQP7O14520 342 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 CYTIPO60759 359 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 TRMUO75648 421 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms