RNA–Protein interactions for RNA: ENST00000423479.7

CTCFL-205, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-205ENST00000423479 DDX6P26196 483 aaKnown RBP eCLIP12.91□□□□□ -0.344e-9■□□□□ 8.1
CTCFL-205ENST00000423479 ACTBP60709 375 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 ACTG1P63261 375 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 SSBP1Q04837 148 aaKnown RBP12.91□□□□□ -0.34
CTCFL-205ENST00000423479 ATXN7L3Q14CW9 347 aaPredicted RBP12.91□□□□□ -0.34
CTCFL-205ENST00000423479 DPY19L2P2Q6ZN68 376 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 MRPL43Q8N983 215 aaKnown RBP12.91□□□□□ -0.34
CTCFL-205ENST00000423479 CDRT4Q8N9R6 151 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 OR52E1Q8NGJ3 308 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 ZNF417Q8TAU3 575 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 SPPL3Q8TCT6 385 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 C2CD4CQ8TF44 421 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 FGF13Q92913 245 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 WNT2BQ93097 391 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 TRPV4Q9HBA0 871 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 MBD2Q9UBB5 411 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 MYO7AQ13402 2215 aa12.91□□□□□ -0.34
CTCFL-205ENST00000423479 PRICKLE3O43900 615 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-205ENST00000423479 BRINP1O60477 761 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 UPK3AO75631 287 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 RAB3DO95716 219 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 WNT11O96014 354 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 CPMP14384 443 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 CD34P28906 385 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 KCNJ3P48549 501 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 POLR2GP62487 172 aaKnown RBP eCLIP12.9□□□□□ -0.34
CTCFL-205ENST00000423479 AVPI1Q5T686 147 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 H3F3CQ6NXT2 135 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 TMEM71Q6P5X7 295 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 OR1J4Q8NGS1 313 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 GAL3ST3Q96A11 431 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 TMEM106AQ96A25 262 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 ALG12Q9BV10 488 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 NMNAT2Q9BZQ4 307 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 TRIM2Q9C040 744 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 ZFP57Q9NU63 452 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 SPHK1Q9NYA1 384 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 EDARQ9UNE0 448 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 TP53BP1Q12888 1972 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-205ENST00000423479 TMEM72A0PK05 275 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 OR2AT4A6NND4 320 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 SNAPINO95295 136 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 CRYBA1P05813 215 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 CMPK1P30085 196 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 POU3F4P49335 361 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 TAS2R19P59542 299 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 ID2Q02363 134 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 SRSF4Q08170 494 aaKnown RBP12.9□□□□□ -0.34
CTCFL-205ENST00000423479 IGSF11Q5DX21 431 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 VWA2Q5GFL6 755 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 ZNF511Q8NB15 262 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 OR1J2Q8NGS2 313 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 PPP1R1CQ8WVI7 109 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 RASD2Q96D21 266 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 RBM18Q96H35 190 aaKnown RBP12.9□□□□□ -0.34
CTCFL-205ENST00000423479 SEC22AQ96IW7 307 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 ADAD1Q96M93 576 aaKnown RBP12.9□□□□□ -0.34
CTCFL-205ENST00000423479 STACQ99469 402 aa12.9□□□□□ -0.34
CTCFL-205ENST00000423479 CARHSP1Q9Y2V2 147 aaKnown RBP12.9□□□□□ -0.34
CTCFL-205ENST00000423479 NOP16Q9Y3C1 178 aaKnown RBP12.9□□□□□ -0.34
CTCFL-205ENST00000423479 OR52A4PA6NMU1 304 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 FADS1O60427 444 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 CDC40O60508 579 aaKnown RBP eCLIP12.89□□□□□ -0.35
CTCFL-205ENST00000423479 SRPX2O60687 465 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-205ENST00000423479 GLAP06280 429 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 CISD3P0C7P0 127 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 TLX1P31314 330 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-205ENST00000423479 GABRA3P34903 492 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 NR0B1P51843 470 aaKnown RBP12.89□□□□□ -0.35
CTCFL-205ENST00000423479 DHRS2Q13268 280 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 ZNF234Q14588 700 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 FNDC3BQ53EP0 1204 aaKnown RBP12.89□□□□□ -0.35
CTCFL-205ENST00000423479 C10orf91Q5T1B1 145 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 FHL5Q5TD97 284 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 LINC01590Q5TEZ4 76 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 C3orf33Q6P1S2 294 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 TMEM205Q6UW68 189 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 USP53Q70EK8 1073 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 GTPBP8Q8N3Z3 284 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-205ENST00000423479 ING5Q8WYH8 240 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 TLNRD1Q9H1K6 362 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 MKKSQ9NPJ1 570 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-205ENST00000423479 MRM2Q9UI43 246 aaKnown RBP12.89□□□□□ -0.35
CTCFL-205ENST00000423479 FBXO4Q9UKT5 387 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 OR2W5A6NFC9 320 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 GRXCR1A8MXD5 290 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 H3BSH0 61 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 ZNF432O94892 652 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 ACTL6AO96019 429 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 AK1P00568 194 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 PEBP1P30086 187 aaKnown RBP12.89□□□□□ -0.35
CTCFL-205ENST00000423479 CASRP41180 1078 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 ACAA2P42765 397 aaKnown RBP12.89□□□□□ -0.35
CTCFL-205ENST00000423479 MESP2Q0VG99 397 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 ELAVL3Q14576 367 aaKnown RBP12.89□□□□□ -0.35
CTCFL-205ENST00000423479 TSC22D1Q15714 1073 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 ZNF77Q15935 545 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 ZNF813Q6ZN06 617 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 FAM122BQ7Z309 247 aa12.89□□□□□ -0.35
CTCFL-205ENST00000423479 ZAR1Q86SH2 424 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms