RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 SLC35D2Q76EJ3 337 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 ZNF786Q8N393 782 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 OR6X1Q8NH79 312 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 ADAMTS16Q8TE57 1224 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 RASSF5Q8WWW0 418 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 MS4A3Q96HJ5 214 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 ZNF75AQ96N20 296 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 ZNF426Q9BUY5 554 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 PCDHAC1Q9H158 963 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 ZNF224Q9NZL3 707 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 ZNF229Q9UJW7 825 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 CUBNO60494 3623 aa9.97□□□□□ -0.81
SQSTM1-203ENST00000422245 TMEM129A0AVI4 362 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 C11orf98E9PRG8 122 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 RNF13O43567 381 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 SYNGR3O43761 229 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 LYPD3O95274 346 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 CH25HO95992 272 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 TGFAP01135 160 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 ADRA2AP08913 450 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 ZNF35P13682 527 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 CD247P20963 164 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 GLRXP35754 106 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 PIGFQ07326 219 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 ZP4Q12836 540 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 GKAP1Q5VSY0 366 aaPredicted RBP9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 REP15Q6BDI9 236 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 UGT2A3Q6UWM9 527 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 PIWIL3Q7Z3Z3 882 aaKnown RBP9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 NANOGNBQ7Z5D8 188 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 DPPA2Q7Z7J5 298 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 WDFY1Q8IWB7 410 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 ARIH2OSQ8N7S6 290 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 VANGL1Q8TAA9 524 aaPredicted RBP9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 SLC26A7Q8TE54 656 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 UBASH3BQ8TF42 649 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 TMEM54Q969K7 222 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 ZNF566Q969W8 418 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 TAMM41Q96BW9 452 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 SLC25A44Q96H78 314 aaPredicted RBP9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 MRPL37Q9BZE1 423 aaKnown RBP9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 NPHS2Q9NP85 383 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 NANSQ9NR45 359 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 MRGBPQ9NV56 204 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 GLTPQ9NZD2 209 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 SLC7A8Q9UHI5 535 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 SLC7A7Q9UM01 511 aa9.96□□□□□ -0.82
SQSTM1-203ENST00000422245 A0A0G2JND7 137 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 SH3PXD2BA1X283 911 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 LRP5LA4QPB2 252 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 KPNA4O00629 521 aaPredicted RBP9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 EDF1O60869 148 aaKnown RBP9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 FARS2O95363 451 aaKnown RBP9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 IGHG1P01857 330 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 THY1P04216 161 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 HIST1H2ABP04908 130 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 IGFBP1P08833 259 aaPredicted RBP9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 OR8G3PP0DMU2 310 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 APEX1P27695 318 aaKnown RBP9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 RAB1AP62820 205 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 RIN1Q13671 783 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 FXNQ16595 210 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 VMACQ2NL98 169 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 NRN1LQ496H8 165 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 METTL21CQ5VZV1 264 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 HIST3H2AQ7L7L0 130 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 HDXQ7Z353 690 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 HDDC2Q7Z4H3 204 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 RBM45Q8IUH3 476 aaKnown RBP9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 ZCCHC24Q8N2G6 241 aaKnown RBP9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 OR4D11Q8NGI4 311 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 OR10A6Q8NH74 314 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 HIST1H2ACQ93077 130 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 THOC1Q96FV9 657 aaKnown RBP9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 TPK1Q9H3S4 243 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 MS4A5Q9H3V2 200 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 C1orf198Q9H425 327 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 VIPAS39Q9H9C1 493 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 TMEM38BQ9NVV0 291 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 TAS2R5Q9NYW4 299 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 REV1Q9UBZ9 1251 aa9.95□□□□□ -0.82
SQSTM1-203ENST00000422245 SLC22A23A1A5C7 686 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 CENPBD1B2RD01 187 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 DHHO43323 396 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 LILRA1O75019 489 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 SERPINA5P05154 406 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 ASAH2BP0C7U1 165 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 PGA4P0DJD7 388 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 PGA3P0DJD8 388 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 UMPSP11172 480 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 PCMT1P22061 227 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 RBM34P42696 430 aaKnown RBP9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 CYLC2Q14093 348 aaPredicted RBP9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 MELKQ14680 651 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 RAB39AQ14964 217 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 MSMPQ1L6U9 139 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 CR1LQ2VPA4 569 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 KRTAP24-1Q3LI83 254 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 COQ5Q5HYK3 327 aa9.94□□□□□ -0.82
SQSTM1-203ENST00000422245 IL17RELQ6ZVW7 336 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms