RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 NPTX1Q15818 432 aa14.96□□□□□ -0.01
MSH6-203ENST00000420813 ZNF74Q16587 644 aa14.96□□□□□ -0.01
MSH6-203ENST00000420813 TTMPQ5BVD1 217 aa14.96□□□□□ -0.01
MSH6-203ENST00000420813 ENTPD8Q5MY95 495 aa14.96□□□□□ -0.01
MSH6-203ENST00000420813 IL17RELQ6ZVW7 336 aa14.96□□□□□ -0.01
MSH6-203ENST00000420813 PIWIL3Q7Z3Z3 882 aaKnown RBP14.96□□□□□ -0.01
MSH6-203ENST00000420813 PATL1Q86TB9 770 aaKnown RBP14.96□□□□□ -0.01
MSH6-203ENST00000420813 OR6X1Q8NH79 312 aa14.96□□□□□ -0.01
MSH6-203ENST00000420813 TMEM54Q969K7 222 aa14.96□□□□□ -0.01
MSH6-203ENST00000420813 SOX7Q9BT81 388 aa14.96□□□□□ -0.01
MSH6-203ENST00000420813 MRPL37Q9BZE1 423 aaKnown RBP14.96□□□□□ -0.01
MSH6-203ENST00000420813 SLC19A3Q9BZV2 496 aa14.96□□□□□ -0.01
MSH6-203ENST00000420813 MS4A5Q9H3V2 200 aa14.96□□□□□ -0.01
MSH6-203ENST00000420813 TRIM33Q9UPN9 1127 aa14.96□□□□□ -0.01
MSH6-203ENST00000420813 CPSF4LA6NMK7 179 aaKnown RBP14.95□□□□□ -0.02
MSH6-203ENST00000420813 C11orf98E9PRG8 122 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 SERPINI2O75830 405 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 LYPD3O95274 346 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 OPN1SWP03999 348 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 VIMP08670 466 aaKnown RBP14.95□□□□□ -0.02
MSH6-203ENST00000420813 APEX1P27695 318 aaKnown RBP14.95□□□□□ -0.02
MSH6-203ENST00000420813 GIPRP48546 466 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 GALK2Q01415 458 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 FXNQ16595 210 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 MSMPQ1L6U9 139 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 CR1LQ2VPA4 569 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 INTS11Q5TA45 600 aaKnown RBP14.95□□□□□ -0.02
MSH6-203ENST00000420813 TTC33Q6PID6 262 aaPredicted RBP14.95□□□□□ -0.02
MSH6-203ENST00000420813 WDR88Q6ZMY6 472 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 SLC35D2Q76EJ3 337 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 RETREG3Q86VR2 466 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 ADAMTS16Q8TE57 1224 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 C1orf159Q96HA4 380 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 MPP4Q96JB8 637 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 ZNF426Q9BUY5 554 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 PCDHAC1Q9H158 963 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 KAT8Q9H7Z6 458 aaKnown RBP14.95□□□□□ -0.02
MSH6-203ENST00000420813 NANSQ9NR45 359 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 INTS9Q9NV88 658 aaKnown RBP14.95□□□□□ -0.02
MSH6-203ENST00000420813 GLTPQ9NZD2 209 aa14.95□□□□□ -0.02
MSH6-203ENST00000420813 TRAPPC13A5PLN9 417 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 THY1P04216 161 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 H2AFXP16104 143 aaPredicted RBP14.94□□□□□ -0.02
MSH6-203ENST00000420813 PCGF2P35227 344 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 SELPLGQ14242 412 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 GKAP1Q5VSY0 366 aaPredicted RBP14.94□□□□□ -0.02
MSH6-203ENST00000420813 REP15Q6BDI9 236 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 LINC01356Q8N9X3 169 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 RASSF5Q8WWW0 418 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 ZNF566Q969W8 418 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 SLC25A44Q96H78 314 aaPredicted RBP14.94□□□□□ -0.02
MSH6-203ENST00000420813 MAGEB18Q96M61 343 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 TPK1Q9H3S4 243 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 TAS2R5Q9NYW4 299 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 REV1Q9UBZ9 1251 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 SLC7A8Q9UHI5 535 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 ZNF229Q9UJW7 825 aa14.94□□□□□ -0.02
MSH6-203ENST00000420813 CH25HO95992 272 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 SERPINA5P05154 406 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 OR8G3PP0DMU2 310 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 CD247P20963 164 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 IL2RGP31785 369 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 LSP1P33241 339 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 CDH15P55291 814 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 NFYCQ13952 458 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 RAB39AQ14964 217 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 DPPA2Q7Z7J5 298 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 RBM45Q8IUH3 476 aaKnown RBP14.93□□□□□ -0.02
MSH6-203ENST00000420813 SKA3Q8IX90 412 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 SLC22A24Q8N4F4 322 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 OR4D11Q8NGI4 311 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 SLC26A7Q8TE54 656 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 TAMM41Q96BW9 452 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 SNX18Q96RF0 628 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 SIKE1Q9BRV8 207 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 TMEM38BQ9NVV0 291 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 SLC7A7Q9UM01 511 aa14.93□□□□□ -0.02
MSH6-203ENST00000420813 HMGB1P1B2RPK0 211 aaPredicted RBP14.92□□□□□ -0.02
MSH6-203ENST00000420813 DHHO43323 396 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 RNF13O43567 381 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 FARS2O95363 451 aaKnown RBP14.92□□□□□ -0.02
MSH6-203ENST00000420813 HIST1H2ABP04908 130 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 ASAH2BP0C7U1 165 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 PGA4P0DJD7 388 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 PGA3P0DJD8 388 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 TRIP10Q15642 601 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 NRN1LQ496H8 165 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 ELFN2Q5R3F8 820 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 LRFN4Q6PJG9 635 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 CCDC80Q76M96 950 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 HIST3H2AQ7L7L0 130 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 TSPYL5Q86VY4 417 aaPredicted RBP14.92□□□□□ -0.02
MSH6-203ENST00000420813 ZNF584Q8IVC4 421 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 OR10A6Q8NH74 314 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 VANGL1Q8TAA9 524 aaPredicted RBP14.92□□□□□ -0.02
MSH6-203ENST00000420813 HIST1H2ACQ93077 130 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 SYT3Q9BQG1 590 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 C19orf24Q9BVV8 132 aa14.92□□□□□ -0.02
MSH6-203ENST00000420813 TMEFF2Q9UIK5 374 aaPredicted RBP14.92□□□□□ -0.02
MSH6-203ENST00000420813 SLC22A23A1A5C7 686 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms