RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DNASE1P24855 282 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 SELENOPP49908 381 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 GZMMP51124 257 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 ART1P52961 327 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 CRYBA2P53672 197 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 NCALDP61601 193 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 EGR4Q05215 589 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 PIGFQ07326 219 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 ITGADQ13349 1161 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 CYLC2Q14093 348 aaPredicted RBP6.09□□□□□ -1.43
HMGN1-205ENST00000419378 P2RY6Q15077 328 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 TAB1Q15750 504 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 MMEL1Q495T6 779 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 BEX5Q5H9J7 111 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 RABL3Q5HYI8 236 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 OTUD3Q5T2D3 398 aaPredicted RBP6.09□□□□□ -1.43
HMGN1-205ENST00000419378 CASP12Q6UXS9 341 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 SLC30A8Q8IWU4 369 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF100Q8IYN0 542 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 TMEM99Q8N816 258 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 LSMEM1Q8N8F7 131 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 RNF152Q8N8N0 203 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 SMYD1Q8NB12 490 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 GPR32P1Q8NGA4 272 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 OR52E4Q8NGH9 312 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 DNAJA4Q8WW22 397 aaPredicted RBP6.09□□□□□ -1.43
HMGN1-205ENST00000419378 TAMM41Q96BW9 452 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 DCLRE1CQ96SD1 692 aaKnown RBP6.09□□□□□ -1.43
HMGN1-205ENST00000419378 ARHGDIGQ99819 225 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 WFDC6Q9BQY6 131 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 NAA11Q9BSU3 229 aaPredicted RBP6.09□□□□□ -1.43
HMGN1-205ENST00000419378 PTDSS2Q9BVG9 487 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 TAPBPLQ9BX59 468 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 HDHD5Q9BXW7 423 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 TRIM2Q9C040 744 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 C12orf10Q9HB07 376 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 ADPRHL2Q9NX46 363 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 ETAA1Q9NY74 926 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 RPS6KB2Q9UBS0 482 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 SLC13A4Q9UKG4 626 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 SLC9A8Q9Y2E8 581 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 FLVCR1Q9Y5Y0 555 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 ROS1P08922 2347 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 A0A0B4J2E0 115 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 LOC100653049A0A140TA62 436 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 A0A1B0GX12 115 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 DIRC3C9JPN6 131 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 M0QX08 132 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 FZD7O75084 574 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 MRPL33O75394 65 aaKnown RBP6.08□□□□□ -1.44
HMGN1-205ENST00000419378 KRT34O76011 436 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 NPPAP01160 153 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 RAF1P04049 648 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 PNMTP11086 282 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 RPS5P46782 204 aaKnown RBP6.08□□□□□ -1.44
HMGN1-205ENST00000419378 P2RY4P51582 365 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 KEAP1Q14145 624 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 SLC17A1Q14916 467 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 OR1Q1Q15612 314 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 NPTX1Q15818 432 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 STK11Q15831 433 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 DUSP7Q16829 419 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 ALG10BQ5I7T1 473 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 INTS11Q5TA45 600 aaKnown RBP6.08□□□□□ -1.44
HMGN1-205ENST00000419378 FBXW9Q5XUX1 488 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 FAM91A1Q658Y4 838 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 ULK3Q6PHR2 472 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 SPNS3Q6ZMD2 512 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 BHLHA15Q7RTS1 189 aaPredicted RBP6.08□□□□□ -1.44
HMGN1-205ENST00000419378 SPATA21Q7Z572 469 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 PATL1Q86TB9 770 aaKnown RBP6.08□□□□□ -1.44
HMGN1-205ENST00000419378 GPAT4Q86UL3 456 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 RANBP3LQ86VV4 465 aaPredicted RBP6.08□□□□□ -1.44
HMGN1-205ENST00000419378 CALHM3Q86XJ0 350 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 UBE2J2Q8N2K1 259 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 PCYOX1LQ8NBM8 494 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 OR9K2Q8NGE7 335 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 MFSD8Q8NHS3 518 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 TMEM45BQ96B21 275 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 RCN3Q96D15 328 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 KTI12Q96EK9 354 aaPredicted RBP6.08□□□□□ -1.44
HMGN1-205ENST00000419378 C8orf49Q96NF6 230 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF385AQ96PM9 386 aaKnown RBP6.08□□□□□ -1.44
HMGN1-205ENST00000419378 FOXC2Q99958 501 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 SH3GL1Q99961 368 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 ECSITQ9BQ95 431 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 SF3B5Q9BWJ5 86 aaKnown RBP6.08□□□□□ -1.44
HMGN1-205ENST00000419378 CXXC4Q9H2H0 198 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 EVA1AQ9H8M9 152 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 MALT1Q9UDY8 824 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 USP22Q9UPT9 525 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 MTORP42345 2549 aa6.08□□□□□ -1.44
HMGN1-205ENST00000419378 PRRC2AP48634 2157 aaKnown RBP6.08□□□□□ -1.44
HMGN1-205ENST00000419378 RAI1Q7Z5J4 1906 aaPredicted RBP6.07□□□□□ -1.44
HMGN1-205ENST00000419378 TRAV36DV7A0A075B6V5 113 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 A0A087WUJ7 227 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 CCT8L1PA6NM43 557 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 FAM220BPB1ANY3 271 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 PDLIM1O00151 329 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 FMO6PO60774 539 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms