RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 A0A087WV48 116 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 LOC102723996A0A087X1L8 192 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 ZNF208O43345 1280 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 DKK1O94907 266 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 FBXO45P0C2W1 286 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 CCL4P13236 92 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 RBMS1P29558 406 aaKnown RBP18.12■□□□□ 0.49
USP39-204ENST00000409766 FOXF1Q12946 379 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 ALKBH1Q13686 389 aaKnown RBP18.12■□□□□ 0.49
USP39-204ENST00000409766 MFSD8Q8NHS3 518 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 OTOSQ8NHW6 89 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 ELP5Q8TE02 316 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 NXPE2Q96DL1 559 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 SMAD5Q99717 465 aaKnown RBP18.12■□□□□ 0.49
USP39-204ENST00000409766 MMP28Q9H239 520 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 PPP4R1LQ9P1A2 415 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 ABRACLQ9P1F3 81 aa18.12■□□□□ 0.49
USP39-204ENST00000409766 IGLV3-32A0A0A0MS00 114 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 IGLV1-36A0A0B4J1U3 117 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 SLC22A23A1A5C7 686 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 MS4A18H0YCH9 400 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 SYPP08247 313 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 HLA-DOBP13765 273 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 MSX1P28360 303 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 CCKBRP32239 447 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 ZP4Q12836 540 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 PCOLCEQ15113 449 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 MS4A18Q3C1V0 323 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 RDH10Q8IZV5 341 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 SLC22A8Q8TCC7 542 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 THEM6Q8WUY1 208 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 ATOH1Q92858 354 aaPredicted RBP18.11■□□□□ 0.49
USP39-204ENST00000409766 DERL3Q96Q80 235 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 RASL10BQ96S79 203 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 DEFB126Q9BYW3 111 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 NPAP1Q9NZP6 1156 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 IKZF2Q9UKS7 526 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 AK6Q9Y3D8 172 aaKnown RBP18.11■□□□□ 0.49
USP39-204ENST00000409766 B3GALT1Q9Y5Z6 326 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 ACOD1A6NK06 481 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 PHYHO14832 338 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 SLC16A7O60669 478 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 KLK3P07288 261 aaPredicted RBP18.11■□□□□ 0.49
USP39-204ENST00000409766 KIR2DL3P43628 341 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 PITPNBP48739 271 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 MC2RQ01718 297 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 PUDPQ08623 228 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 MFSD13AQ14CX5 517 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 NTRK2Q16620 822 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 UBE2J2Q8N2K1 259 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 KDM8Q8N371 416 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 OR5H6Q8NGV6 325 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 OR5AK2Q8NH90 309 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 AMELYQ99218 206 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 TSPAN10Q9H1Z9 355 aaPredicted RBP18.11■□□□□ 0.49
USP39-204ENST00000409766 GPN3Q9UHW5 284 aaPredicted RBP18.11■□□□□ 0.49
USP39-204ENST00000409766 KCNG2Q9UJ96 466 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 WIF1Q9Y5W5 379 aa18.11■□□□□ 0.49
USP39-204ENST00000409766 FZD7O75084 574 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 CTLA4P16410 223 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 MAGEB1P43366 347 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 CENPAP49450 140 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 BLVRAP53004 296 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 MELKQ14680 651 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 OR7A5Q15622 319 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 SLC25A53Q5H9E4 307 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 DDIT4LQ96D03 193 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 ORAI1Q96D31 301 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 METTL7AQ9H8H3 244 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 SDHAF3Q9NRP4 125 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 ING1Q9UK53 422 aaPredicted RBP18.1■□□□□ 0.49
USP39-204ENST00000409766 ANKRD61A6NGH8 418 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 ZNF593O00488 134 aaPredicted RBP18.1■□□□□ 0.49
USP39-204ENST00000409766 EFNA2O43921 213 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 HLA-DQA2P01906 255 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 UMODP07911 640 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 SNRPBP14678 240 aaKnown RBP18.1■□□□□ 0.49
USP39-204ENST00000409766 MAP2K6P52564 334 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 ETFDHQ16134 617 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 BTBD16Q32M84 506 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 FAM198BQ6UWH4 519 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 H1FNTQ75WM6 255 aaPredicted RBP18.1■□□□□ 0.49
USP39-204ENST00000409766 ZNF248Q8NDW4 579 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 SPACA9Q96E40 222 aaPredicted RBP18.1■□□□□ 0.49
USP39-204ENST00000409766 ZC3HAV1LQ96H79 300 aaKnown RBP18.1■□□□□ 0.49
USP39-204ENST00000409766 MRGPRX4Q96LA9 322 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 FOXN4Q96NZ1 517 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 GFI1Q99684 422 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 RBFOX1Q9NWB1 397 aaKnown RBP18.1■□□□□ 0.49
USP39-204ENST00000409766 MRPL22Q9NWU5 206 aaKnown RBP18.1■□□□□ 0.49
USP39-204ENST00000409766 FBXO4Q9UKT5 387 aa18.1■□□□□ 0.49
USP39-204ENST00000409766 A0A0B4J203 849 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 A0A1B0GVC2 190 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 A6NIN4 97 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 HSPB2A8KAH6 182 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 SHISA8B8ZZ34 492 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 TFECO14948 347 aaPredicted RBP18.09■□□□□ 0.49
USP39-204ENST00000409766 KLF7O75840 302 aaPredicted RBP18.09■□□□□ 0.49
USP39-204ENST00000409766 IMPDH2P12268 514 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 MAP2K3P46734 347 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms