RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 OR10K2Q6IF99 312 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 POMZP3Q6PJE2 187 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 KRT77Q7Z794 578 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 DND1Q8IYX4 353 aaKnown RBP9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 C12orf45Q8N5I9 185 aaPredicted RBP9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 OR52E1Q8NGJ3 308 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 JAM3Q9BX67 310 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 PCBD2Q9H0N5 130 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 EPHX3Q9H6B9 360 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 MBNL1Q9NR56 388 aaKnown RBP9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 FLRT3Q9NZU0 649 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 DUX4Q9UBX2 424 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 ATXN7L1Q9ULK2 861 aaPredicted RBP9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 ELOA3DA6NLF2 546 aaPredicted RBP9□□□□□ -0.97
PTCHD4-202ENST00000398738 SULT1C2O00338 296 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 CXCL14O95715 111 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 IL5P05113 134 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 SPP1P10451 314 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 SLC2A5P22732 501 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 MPGP29372 298 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 MNDAP41218 407 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 RAB28P51157 221 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 CCR4P51679 360 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 HTRA4P83105 476 aaPredicted RBP9□□□□□ -0.97
PTCHD4-202ENST00000398738 ELOA3BQ3SY89 546 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 EIPR1Q53HC9 387 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 ARHGAP40Q5TG30 622 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 METRNLQ641Q3 311 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 LEG1Q6P5S2 330 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 SLC36A1Q7Z2H8 476 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 NAXDQ8IW45 347 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 ELOA3Q8NG57 546 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 OR4N2Q8NGD1 307 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 OR4K14Q8NGD5 310 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 OR1J2Q8NGS2 313 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 OR5AK2Q8NH90 309 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 NR4A3Q92570 626 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 PPP1R14AQ96A00 147 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 CAPNS2Q96L46 248 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 TMPRSS13Q9BYE2 586 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 TINAGL1Q9GZM7 467 aaPredicted RBP9□□□□□ -0.97
PTCHD4-202ENST00000398738 ZMAT5Q9UDW3 170 aaKnown RBP9□□□□□ -0.97
PTCHD4-202ENST00000398738 TRAV14DV4A0A0A6YYC5 116 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 OR14I1A6ND48 311 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 OR6C65A6NJZ3 312 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 PRSS44E7EML9 344 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 PRNPP04156 253 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 DLSTP36957 453 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 CAPZA1P52907 286 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 SKP1P63208 163 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 CDK3Q00526 305 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 DHODHQ02127 395 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 EIF2B5Q13144 721 aaKnown RBP9□□□□□ -0.97
PTCHD4-202ENST00000398738 PABPC1L2AQ5JQF8 200 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 TMEM205Q6UW68 189 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 MCATQ8IVS2 390 aaKnown RBP9□□□□□ -0.97
PTCHD4-202ENST00000398738 TEX19Q8NA77 164 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 TSEN15Q8WW01 171 aaKnown RBP9□□□□□ -0.97
PTCHD4-202ENST00000398738 OR2S2Q9NQN1 319 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 GPR34Q9UPC5 381 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 FAM96BQ9Y3D0 163 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 ANAPC1Q9H1A4 1944 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 CHD7Q9P2D1 2997 aa9□□□□□ -0.97
PTCHD4-202ENST00000398738 OR6C76A6NM76 312 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 LINC00587B1AMM8 73 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 SGCEO43556 437 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 GLSO94925 669 aaPredicted RBP8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 F13BP05160 661 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 NID1P14543 1247 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 EMDP50402 254 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 RAB13P51153 203 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 PSMD4P55036 377 aaKnown RBP8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 TMEM35AQ53FP2 167 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF468Q5VIY5 522 aaPredicted RBP8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 PRAMEF17Q5VTA0 474 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 H3F3CQ6NXT2 135 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 STEAP1BQ6NZ63 245 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 ARHGAP11AQ6P4F7 1023 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 PRSS41Q7RTY9 318 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 SLC39A11Q8N1S5 342 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF619Q8N2I2 560 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 OR5T3Q8NGG3 340 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 OR10R2Q8NGX6 335 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 OR6K3Q8NGY3 331 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 OR10G6Q8NH81 332 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 MIB2Q96AX9 1013 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 MOAP1Q96BY2 351 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 MENTQ9BUN1 341 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 APMAPQ9HDC9 416 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 C14orf105Q9NVL8 296 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 MED9Q9NWA0 146 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 KLHDC2Q9Y2U9 406 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 TBC1D3KA0A087X1G2 549 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 TSPAN11A1L157 253 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 FITM1A5D6W6 292 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 TBC1D3BA6NDS4 549 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 TBC1D3FA6NER0 549 aaPredicted RBP8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 ABCD4O14678 606 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 VEGFDO43915 354 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF254O75437 659 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms