RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 SHC2P98077 582 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 OPCMLQ14982 345 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 RAB6CQ53S08 254 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 RTP4Q96DX8 246 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 GORASP2Q9H8Y8 452 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 MED9Q9NWA0 146 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 MN1Q10571 1320 aaPredicted RBP13.68□□□□□ -0.22
CCDC50-201ENST00000392455 A0A0J9YY10 115 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 XRCC3O43542 346 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 OPRL1P41146 370 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 TESK1Q15569 626 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 BTNL3Q6UXE8 466 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 NXF5Q9H1B4 397 aaKnown RBP13.68□□□□□ -0.22
CCDC50-201ENST00000392455 GCGP01275 180 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 GABREP78334 506 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 NPY5RQ15761 445 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 APCDD1Q8J025 514 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 SIGLEC10Q96LC7 697 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 CXorf58Q96LI9 332 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 ESRP2Q9H6T0 727 aaKnown RBP13.68□□□□□ -0.22
CCDC50-201ENST00000392455 C1GALT1Q9NS00 363 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 KCMF1Q9P0J7 381 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 TMEM235A6NFC5 223 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 SCGB1A1P11684 91 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 UBE2IP63279 158 aaKnown RBP13.68□□□□□ -0.22
CCDC50-201ENST00000392455 THNSL2Q86YJ6 484 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 ENTHD1Q8IYW4 607 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 ATG101Q9BSB4 218 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 MYEF2Q9P2K5 600 aaKnown RBP13.68□□□□□ -0.22
CCDC50-201ENST00000392455 INTS6Q9UL03 887 aaKnown RBP13.68□□□□□ -0.22
CCDC50-201ENST00000392455 CACNG3O60359 315 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 STAG3L3P0CL85 134 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 ADGRE4PQ86SQ3 457 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 LSRQ86X29 649 aaPredicted RBP13.68□□□□□ -0.22
CCDC50-201ENST00000392455 SEH1LQ96EE3 360 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 MENTQ9BUN1 341 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 POLDIP2Q9Y2S7 368 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 PMS2P1A4D2B8 440 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 ZFP92A6NM28 416 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 BIDP55957 195 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 OR5K2Q8NHB8 316 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 OR2T6Q8NHC8 308 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 DYNC2LI1Q8TCX1 351 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 CABLES2Q9BTV7 478 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 CORINQ9Y5Q5 1042 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 A0A1B0GTW7 788 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 MEIS3P2A8K0S8 358 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 OR7A5Q15622 319 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 H3F3CQ6NXT2 135 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 OR2G3Q8NGZ4 309 aa13.68□□□□□ -0.22
CCDC50-201ENST00000392455 METTL17Q9H7H0 456 aaPredicted RBP13.68□□□□□ -0.22
CCDC50-201ENST00000392455 ABCD4O14678 606 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 GPRIN1Q7Z2K8 1008 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 ZNF561Q8N587 486 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 LOC100289279A0A1B0GTE1 492 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 PRAMEF4O60810 478 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 RPS17P08708 135 aaKnown RBP13.67□□□□□ -0.22
CCDC50-201ENST00000392455 POU3F3P20264 500 aaPredicted RBP13.67□□□□□ -0.22
CCDC50-201ENST00000392455 HTR4Q13639 388 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 RAB33AQ14088 237 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 TFAP2EQ6VUC0 442 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 Q6ZTK2 550 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 RASD2Q96D21 266 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 A0A0A6YYJ9 748 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 PHF1O43189 567 aaPredicted RBP13.67□□□□□ -0.22
CCDC50-201ENST00000392455 PPP1R3BQ86XI6 285 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 TMEM72A0PK05 275 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 GALR2O43603 387 aaPredicted RBP13.67□□□□□ -0.22
CCDC50-201ENST00000392455 GPR32O75388 356 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 IQCF3P0C7M6 154 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 OMGP23515 440 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 BCL6P41182 706 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 OR10A3P58181 314 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 KIAA1024LP59773 190 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 HBA1P69905 142 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 DHODHQ02127 395 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 ZFP41Q8N8Y5 198 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 RBPMSQ93062 196 aaKnown RBP13.67□□□□□ -0.22
CCDC50-201ENST00000392455 EBF1Q9UH73 591 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 TP53BP1Q12888 1972 aaPredicted RBP13.67□□□□□ -0.22
CCDC50-201ENST00000392455 STC2O76061 302 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 PPP1CAP62136 330 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 OR4D1Q15615 310 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 OR10X1Q8NGY0 326 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 NXPE3Q969Y0 559 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 KCNK15Q9H427 330 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 CD276Q5ZPR3 534 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 CPZQ66K79 652 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 ABLIM2Q6H8Q1 611 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 ATG2BQ96BY7 2078 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.67□□□□□ -0.22
CCDC50-201ENST00000392455 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.67□□□□□ -0.22
CCDC50-201ENST00000392455 HELTA6NFD8 242 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 C17orf105B2RV13 164 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 ABCD3P28288 659 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 HOXD13P35453 343 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 DOC2AQ14183 400 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 UNC50Q53HI1 259 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 PSAPL1Q6NUJ1 521 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 OCEL1Q9H607 264 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms