RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 IGHG1P01857 330 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 RPN2P04844 631 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 TACSTD2P09758 323 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 TRIM49P0CI25 452 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 TRIM49CP0CI26 452 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 RBMY1CP0DJD4 496 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 PSKH1P11801 424 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ZNF250P15622 560 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 H2AFXP16104 143 aaPredicted RBP1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 HLA-GP17693 338 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 COX5AP20674 150 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 MAGP20916 626 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 SYT1P21579 422 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ANOS1P23352 680 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 IVDP26440 423 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 HLA-DMAP28067 261 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 HOXA9P31269 272 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 FGF9P31371 208 aaPredicted RBP1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ACVR1BP36896 505 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 COILP38432 576 aaPredicted RBP1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 RFX3P48380 749 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 CX3CR1P49238 355 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 PRELPP51888 382 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 FBXW4P57775 412 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 OR10A3P58181 314 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ACTBP60709 375 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 LMO4P61968 165 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ACTA2P62736 377 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ACTG1P63261 375 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ACTG2P63267 376 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ACTC1P68032 377 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ACTA1P68133 377 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 MRPS22P82650 360 aaKnown RBP1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 VLDLRP98155 873 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 KDSRQ06136 332 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 GAGE5Q13069 117 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 GAGE6Q13070 117 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 GCKRQ14397 625 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 CYTH1Q15438 398 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 C17orf58Q2M2W7 97 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 KIAA1644Q3SXP7 199 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 C5orf47Q569G3 176 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 TIGD3Q6B0B8 471 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 PTRHD1Q6GMV3 140 aaKnown RBP1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 OR52E8Q6IFG1 317 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 UFSP1Q6NVU6 142 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 EMBQ6PCB8 327 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 RFWD3Q6PCD5 774 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ULK3Q6PHR2 472 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 APOOLQ6UXV4 268 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 CERS6Q6ZMG9 384 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 TIPARPQ7Z3E1 657 aaKnown RBP1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 NOTCH2NLQ7Z3S9 236 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 SETD3Q86TU7 594 aaPredicted RBP1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 SLC26A11Q86WA9 606 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 RALGPS2Q86X27 583 aaPredicted RBP1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 HOGA1Q86XE5 327 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 CBLN2Q8IUK8 224 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 NUDCD3Q8IVD9 361 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 FUNDC1Q8IVP5 155 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 PRR22Q8IZ63 422 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 KRT222Q8N1A0 295 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ABHD12Q8N2K0 398 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 LRRC52Q8N7C0 313 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ZNF781Q8N8C0 355 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ICA1LQ8NDH6 482 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 OR5AP2Q8NGF4 316 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 OR10G8Q8NGN5 311 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 OR13A1Q8NGR1 328 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 OR2Y1Q8NGV0 311 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 RFESDQ8TAC1 157 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 PCNPQ8WW12 178 aaKnown RBP1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ING5Q8WYH8 240 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 OR8D1Q8WZ84 308 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ANP32BQ92688 251 aaKnown RBP1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 SMARCD2Q92925 531 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ZNF524Q96C55 264 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 WDR34Q96EX3 536 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 SDSLQ96GA7 329 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 RNF170Q96K19 258 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 PPP1R36Q96LQ0 422 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ZNF354BQ96LW1 612 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ZNF488Q96MN9 340 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 GLT1D1Q96MS3 346 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 SERPINB11Q96P15 392 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 OR5B12Q96R08 314 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 MCHR1Q99705 422 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 KIR2DL4Q99706 377 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 LITAFQ99732 161 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 CTRCQ99895 268 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 SH3GL1Q99961 368 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 CLEC7AQ9BXN2 247 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 RAB34Q9BZG1 259 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ULBP2Q9BZM5 246 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 DEFB129Q9H1M3 183 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 SLC38A1Q9H2H9 487 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 ADNPQ9H2P0 1102 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 PIGUQ9H490 435 aa1.71□□□□□ -2.14
SNORA40.19-201ENST00000390846 REEP4Q9H6H4 257 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms