RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CAMK2BQ13554 666 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 HTR4Q13639 388 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 IHHQ14623 411 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 GRINAQ7Z429 371 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 RBM45Q8IUH3 476 aaKnown RBP14.78□□□□□ -0.04
COL2A1-202ENST00000380518 SLC37A2Q8TED4 501 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 SECTM1Q8WVN6 248 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 HSD17B8Q92506 261 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 FGGYQ96C11 551 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 ARPC5LQ9BPX5 153 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 E9PI62 339 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 ZNF728P0DKX0 622 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 RPS19P39019 145 aaKnown RBP14.78□□□□□ -0.04
COL2A1-202ENST00000380518 CARD18P57730 90 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 DHRS4L2Q6PKH6 230 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 SYT9Q86SS6 491 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 NKAIN4Q8IVV8 208 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 HLA-CQ95604 372 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 TEAD3Q99594 435 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 EMC7Q9NPA0 242 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.77□□□□□ -0.04
COL2A1-202ENST00000380518 PRAMEF4O60810 478 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 SBK2P0C263 348 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 S100A7AQ86SG5 101 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 FAM26EQ8N5C1 309 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 SGPP1Q9BX95 441 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 SAGE1Q9NXZ1 904 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 GNG12Q9UBI6 72 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 GHRLQ9UBU3 117 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 PLEKHM1Q9Y4G2 1056 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 TPPPO94811 219 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 THBS1P07996 1170 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 DPTQ07507 201 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 ZNF77Q15935 545 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 MARCH3Q86UD3 253 aa14.77□□□□□ -0.04
COL2A1-202ENST00000380518 A0A1B0GX78 115 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 YKT6O15498 198 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 IGLV3-25P01717 112 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 HBE1P02100 147 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 ABOP16442 354 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 PTGER4P35408 488 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 PPT1P50897 306 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 RRADP55042 308 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 BDH1Q02338 343 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 ZNF813Q6ZN06 617 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 H1FNTQ75WM6 255 aaPredicted RBP14.77□□□□□ -0.05
COL2A1-202ENST00000380518 OR10K1Q8NGX5 313 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 CPNE4Q96A23 557 aaPredicted RBP14.77□□□□□ -0.05
COL2A1-202ENST00000380518 MBNL1Q9NR56 388 aaKnown RBP14.77□□□□□ -0.05
COL2A1-202ENST00000380518 NDRG4Q9ULP0 352 aaKnown RBP14.77□□□□□ -0.05
COL2A1-202ENST00000380518 RFXAPO00287 272 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 CD27P26842 260 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 SNCAP37840 140 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 HBG1P69891 147 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 HBG2P69892 147 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 ELAVL1Q15717 326 aaKnown RBP14.77□□□□□ -0.05
COL2A1-202ENST00000380518 OTUD1Q5VV17 481 aaPredicted RBP14.77□□□□□ -0.05
COL2A1-202ENST00000380518 OR4N2Q8NGD1 307 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 SLC25A43Q8WUT9 341 aaPredicted RBP14.77□□□□□ -0.05
COL2A1-202ENST00000380518 PDFQ9HBH1 243 aa14.77□□□□□ -0.05
COL2A1-202ENST00000380518 ZNF814B7Z6K7 855 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 G3V3Y1 287 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 K7ESM1 405 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 PMS2P2O95744 297 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 SMIM18P0DKX4 95 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 RBPJQ06330 500 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 MLF2Q15773 248 aaPredicted RBP14.76□□□□□ -0.05
COL2A1-202ENST00000380518 TRMT12Q53H54 448 aaKnown RBP14.76□□□□□ -0.05
COL2A1-202ENST00000380518 WDR88Q6ZMY6 472 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 SLC51BQ86UW2 128 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 GJC3Q8NFK1 279 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 ATP13A2Q9NQ11 1180 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 PRAMEF25A6NGN4 478 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 SELENOFO60613 162 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 CHRM2P08172 466 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 OMGP23515 440 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 PCSK6P29122 969 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 EPHA5P54756 1037 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 FAPQ12884 760 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 OR11L1Q8NGX0 322 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 LINC01599Q8WXQ3 324 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 SDF2Q99470 211 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 NGBQ9NPG2 151 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 PADI1Q9ULC6 663 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 RPS10-NUDT3A0A1W2PQS6 291 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 PRKACAP17612 351 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 ELK1P19419 428 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 RPS10P46783 165 aaKnown RBP14.76□□□□□ -0.05
COL2A1-202ENST00000380518 BTN1A1Q13410 526 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 NKAIN2Q5VXU1 208 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 OR52W1Q6IF63 320 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 PLPP5Q8NEB5 264 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 ANKRD9Q96BM1 317 aaPredicted RBP14.76□□□□□ -0.05
COL2A1-202ENST00000380518 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.76□□□□□ -0.05
COL2A1-202ENST00000380518 SIT1Q9Y3P8 196 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 HMGN4O00479 90 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 ALOX12BO75342 701 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 CCR6P51684 374 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 MAP2K6P52564 334 aa14.76□□□□□ -0.05
COL2A1-202ENST00000380518 PYCR3Q53H96 274 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms