RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 C2orf92A0A1B0GVN3 265 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 C17orf51A8MQB3 221 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 FAM166BA8MTA8 275 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 GTPBP1O00178 669 aaKnown RBP11.17□□□□□ -0.62
VRK3-202ENST00000377011 BHLHE40O14503 412 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 RNF13O43567 381 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 PIP5K1CO60331 668 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 PLOD3O60568 738 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 SLC43A1O75387 559 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 STX11O75558 287 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 FAM157BP0CG42 384 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 NID1P14543 1247 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 BMP7P18075 431 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 CD79BP40259 229 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 CTBP2P56545 445 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 CLDN20P56880 219 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 GNG2P59768 71 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 RIPPLY1Q0D2K3 151 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 HBMQ6B0K9 141 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 VASNQ6EMK4 673 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 SHFQ7M4L6 423 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 NANOGNBQ7Z5D8 188 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 LRRC28Q86X40 367 aaPredicted RBP11.17□□□□□ -0.62
VRK3-202ENST00000377011 CPOQ8IVL8 374 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 TMEM178AQ8NBL3 297 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 ZFAND1Q8TCF1 268 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 SAMD8Q96LT4 415 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 TMED9Q9BVK6 235 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 PRR14Q9BWN1 585 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 MMP28Q9H239 520 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 DIABLOQ9NR28 239 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 SH3BGRL2Q9UJC5 107 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 LIPGQ9Y5X9 500 aa11.17□□□□□ -0.62
VRK3-202ENST00000377011 CHCHD2Q9Y6H1 151 aaPredicted RBP11.17□□□□□ -0.62
VRK3-202ENST00000377011 LYRM1O43325 122 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 HPGDSO60760 199 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 LYPD3O95274 346 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 CH25HO95992 272 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 RFPL3SP0C7P2 107 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 FOXO1Q12778 655 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 POU4F2Q12837 409 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 GALEQ14376 348 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 DUSP5Q16690 384 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 ZSWIM7Q19AV6 140 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 ZNF613Q6PF04 617 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 SMARCD3Q6STE5 483 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 GFRALQ6UXV0 394 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 NPSR1Q6W5P4 371 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 TMEM91Q6ZNR0 172 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 TRILQ7L0X0 811 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 MEX3DQ86XN8 651 aaKnown RBP11.16□□□□□ -0.62
VRK3-202ENST00000377011 CDK20Q8IZL9 346 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 OR2M7Q8NG81 312 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 OR4N2Q8NGD1 307 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 OR5L2Q8NGL0 311 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 TMEM239Q8WW34 195 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 PELOQ9BRX2 385 aaKnown RBP11.16□□□□□ -0.62
VRK3-202ENST00000377011 TTYH2Q9BSA4 534 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 MARVELD1Q9BSK0 173 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 CMC2Q9NRP2 79 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 ACOXLQ9NUZ1 547 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 PAQR5Q9NXK6 330 aaPredicted RBP11.16□□□□□ -0.62
VRK3-202ENST00000377011 ING3Q9NXR8 418 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 HAO2Q9NYQ3 351 aa11.16□□□□□ -0.62
VRK3-202ENST00000377011 NUFIP1Q9UHK0 495 aaKnown RBP11.16□□□□□ -0.62
VRK3-202ENST00000377011 CDHR4A6H8M9 788 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 ANKRD61A6NGH8 418 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 C12orf71A8MTZ7 269 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 CDC42EP2O14613 210 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 TFECO14948 347 aaPredicted RBP11.15□□□□□ -0.62
VRK3-202ENST00000377011 LRRTM2O43300 516 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 ORC5O43913 435 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 C1QBP02746 253 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 MT-ND5P03915 603 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 FBXO45P0C2W1 286 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 APEX1P27695 318 aaKnown RBP11.15□□□□□ -0.62
VRK3-202ENST00000377011 BTG1P62324 171 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 ACTC1P68032 377 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 ACTA1P68133 377 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 BIKQ13323 160 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 TNK1Q13470 666 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 IL18Q14116 193 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 DCST2Q5T1A1 773 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 SLC29A4Q7RTT9 530 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 KLBQ86Z14 1044 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 ZFP41Q8N8Y5 198 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 ZFP62Q8NB50 900 aaPredicted RBP11.15□□□□□ -0.62
VRK3-202ENST00000377011 HOXB13Q92826 284 aaPredicted RBP11.15□□□□□ -0.62
VRK3-202ENST00000377011 CREB3L1Q96BA8 519 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 SPACA9Q96E40 222 aaPredicted RBP11.15□□□□□ -0.62
VRK3-202ENST00000377011 DMRTB1Q96MA1 342 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 GPR137Q96N19 417 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 ZNF559Q9BR84 538 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 ALG8Q9BVK2 526 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 HDHD5Q9BXW7 423 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 DEFB127Q9H1M4 99 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 RERGLQ9H628 205 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 FOLH1BQ9HBA9 442 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 RANGRFQ9HD47 186 aaPredicted RBP11.15□□□□□ -0.62
VRK3-202ENST00000377011 RPRD1BQ9NQG5 326 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms