RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 EDNRAP25101 427 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 PITPNBP48739 271 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 SLC25A35Q3KQZ1 300 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 PRR22Q8IZ63 422 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 DUSP18Q8NEJ0 188 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 Q96M85 177 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 SMAD5Q99717 465 aaKnown RBP14.05□□□□□ -0.16
CCDC40-202ENST00000374876 WACQ9BTA9 647 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 CRB3Q9BUF7 120 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 TGIF2Q9GZN2 237 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 ACOXLQ9NUZ1 547 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 HIF3AQ9Y2N7 669 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 NPFFR2Q9Y5X5 522 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 CACNA1BQ00975 2339 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 IGKV3D-11A0A0A0MRZ8 115 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 A0A1W2PPK0 400 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 IDSB3KWA1 339 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 GLCEO94923 617 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 IGKV3-11P04433 115 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 HSF2Q03933 536 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 ELAVL1Q15717 326 aaKnown RBP14.05□□□□□ -0.16
CCDC40-202ENST00000374876 CCDC58Q4VC31 144 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 ALG10Q5BKT4 473 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 UTS2BQ765I0 119 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 TRILQ7L0X0 811 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 ADAMTS17Q8TE56 1095 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 LIPHQ8WWY8 451 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 SLC7A6Q92536 515 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 MOGAT1Q96PD6 335 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 OR2B2Q9GZK3 357 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 PRORYQ9H606 182 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 MMP25Q9NPA2 562 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 RPRD1BQ9NQG5 326 aaKnown RBP14.05□□□□□ -0.16
CCDC40-202ENST00000374876 NLKQ9UBE8 527 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 NXT1Q9UKK6 140 aaKnown RBP14.05□□□□□ -0.16
CCDC40-202ENST00000374876 COPS3Q9UNS2 423 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 SLC6A5Q9Y345 797 aa14.05□□□□□ -0.16
CCDC40-202ENST00000374876 HEATR5AQ86XA9 2040 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 A0A0B4J293 547 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 CENPXA8MT69 81 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 MASP2O00187 686 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 DDAH2O95865 285 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 PAHP00439 452 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 HEXBP07686 556 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 CD14P08571 375 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 IL12BP29460 328 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 EMP2P54851 167 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 DEFB109BQ30KR1 87 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 HLA-DQA1Q5Y7H0 255 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 GLCCI1Q86VQ1 547 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 DTX3Q8N9I9 347 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 ZNF721Q8TF20 911 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 ADIPOR1Q96A54 375 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 RFT1Q96AA3 541 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 DMRTB1Q96MA1 342 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 FAM117AQ9C073 453 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 VN1R1Q9GZP7 353 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 NUFIP1Q9UHK0 495 aaKnown RBP14.04□□□□□ -0.16
CCDC40-202ENST00000374876 TEKT2Q9UIF3 430 aa14.04□□□□□ -0.16
CCDC40-202ENST00000374876 NOTOA8MTQ0 251 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 FAM171A2A8MVW0 826 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 ICOSLGO75144 302 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 GATBO75879 557 aaKnown RBP14.03□□□□□ -0.16
CCDC40-202ENST00000374876 CD1AP06126 327 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 MST1P26927 711 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 TACR3P29371 465 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 PSMB10P40306 273 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 CDKN2AP42771 156 aaKnown RBP14.03□□□□□ -0.16
CCDC40-202ENST00000374876 SLC6A8P48029 635 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 CTXN1P60606 82 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 DCAF7P61962 342 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 TATDN3Q17R31 274 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 LYPD4Q6UWN0 246 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 PPP1R32Q7Z5V6 425 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 LSM14AQ8ND56 463 aaKnown RBP14.03□□□□□ -0.16
CCDC40-202ENST00000374876 C8orf44Q96CB5 159 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 THAP7Q9BT49 309 aaPredicted RBP14.03□□□□□ -0.16
CCDC40-202ENST00000374876 ALG12Q9BV10 488 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 NDEL1Q9GZM8 345 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 PCSK5Q92824 1860 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 A0A1B0GVC2 190 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 A6NIN4 97 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 HCRTR2O43614 444 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 GMFGO60234 142 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 FZD7O75084 574 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 UCHL1P09936 223 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 APEHP13798 732 aaKnown RBP14.03□□□□□ -0.16
CCDC40-202ENST00000374876 HLA-DMAP28067 261 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 GRPRP30550 384 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 SDHAP31040 664 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 EGR4Q05215 589 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 NSDHLQ15738 373 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 NANOGNBQ7Z5D8 188 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 DAZLQ92904 295 aaKnown RBP14.03□□□□□ -0.16
CCDC40-202ENST00000374876 OR14A2Q96R54 314 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 PDCD1LG2Q9BQ51 273 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 NUDT9Q9BW91 350 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 LAT2Q9GZY6 243 aa14.03□□□□□ -0.16
CCDC40-202ENST00000374876 TP63Q9H3D4 680 aaPredicted RBP14.03□□□□□ -0.16
CCDC40-202ENST00000374876 TCRBV16S1A1N1A0A5B0 115 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms