RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 PYCR3Q53H96 274 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 ACOT7LQ6ZUV0 252 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 KCNIP1Q9NZI2 227 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 DAPP1Q9UN19 280 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 GPR55Q9Y2T6 319 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 A8MVM7 634 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF385BQ569K4 471 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF749O43361 778 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 EIF4E2O60573 245 aaKnown RBP10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 EPXP11678 715 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 MED16Q9Y2X0 877 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 EIF1P41567 113 aaKnown RBP10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 TEX261Q6UWH6 196 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 U3KQ87 197 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 DOCK7Q96N67 2140 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 D6RAR5 112 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 EPHA5P54756 1037 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 DIO2Q92813 273 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 WDR77Q9BQA1 342 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 TRAF4Q9BUZ4 470 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 POFUT1Q9H488 388 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 ACACAQ13085 2346 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 A0A0A6YYC8 382 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 I3L1I5 382 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 ETHE1O95571 254 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 IRS1P35568 1242 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 RAET1LQ5VY80 246 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 UQCC3Q6UW78 93 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 PRSS35Q8N3Z0 413 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZC3HAV1LQ96H79 300 aaKnown RBP10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 LTB4R2Q9NPC1 389 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 SLC6A13Q9NSD5 602 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 EHFQ9NZC4 300 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 DDAH2O95865 285 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 CNR1P21554 472 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 NR0B1P51843 470 aaKnown RBP10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 NTHL1P78549 312 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 DUSP5Q16690 384 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF296Q8WUU4 475 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 CLUP10909 449 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 AKR1C2P52895 323 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF77Q15935 545 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 ANKRD34AQ69YU3 496 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF679Q8IYX0 411 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 NUDT8Q8WV74 236 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 R3HDMLQ9H3Y0 253 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 LRFN1Q9P244 771 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 A0A0G2JMZ2 1700 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 LRRC37A2A6NM11 1700 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 MED6O75586 246 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 MGMTP16455 207 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 CSNK1A1P48729 337 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 GLYATL3Q5SZD4 288 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 MDGA2Q7Z553 956 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 BCDIN3DQ7Z5W3 292 aaKnown RBP10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 BTLAQ7Z6A9 289 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 C19orf47Q8N9M1 422 aaKnown RBP10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 CNTNAP3Q9BZ76 1288 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 NPIPA5A0A0B4J1W7 369 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 AGAP14A8MT82 685 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 NPIPA7E9PJI5 369 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 TMPRSS11DO60235 418 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 SERPINE2P07093 398 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 NPIPA8P0DM63 369 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 MAKP20794 623 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 FAM78AQ5JUQ0 283 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 DHRS1Q96LJ7 313 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 FKRPQ9H9S5 495 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 FBXL4Q9UKA2 621 aa10.86□□□□□ -0.67
CDC42BPA-202ENST00000366764 SULT2B1O00204 365 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 SPI1P17947 270 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 RAB31Q13636 194 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 PRSS36Q5K4E3 855 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 ADIPOR2Q86V24 386 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF695Q8IW36 515 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 LCORQ96JN0 433 aaPredicted RBP10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 RPL23AP62750 156 aaKnown RBP10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 DGCR2P98153 550 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 Q6ZTK2 550 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 USP53Q70EK8 1073 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 CSF3RQ99062 836 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 DNMT3BQ9UBC3 853 aaKnown RBP10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 CASP8AP2Q9UKL3 1982 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 LSM5Q9Y4Y9 91 aaKnown RBP10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 CPT2P23786 658 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 BCL2A1Q16548 175 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 POM121CA8CG34 1229 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 SMLR1H3BR10 107 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 BRINP1O60477 761 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 TACR3P29371 465 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 GJA4P35212 333 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 P2RX3P56373 397 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 POU3F1Q03052 451 aaPredicted RBP10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF266Q14584 549 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 FAM71CQ8NEG0 241 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 OIT3Q8WWZ8 545 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 PDCD1LG2Q9BQ51 273 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 RIF1Q5UIP0 2472 aaKnown RBP10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 RPL35P42766 123 aaKnown RBP10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 CARD17Q5XLA6 110 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms