RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 REV1Q9UBZ9 1251 aa9.21□□□□□ -0.94
CAPN3-204ENST00000356316 FBN3Q75N90 2809 aa9.21□□□□□ -0.94
CAPN3-204ENST00000356316 TMEM129A0AVI4 362 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 LRP5LA4QPB2 252 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 ZNF503-AS2A6NEH8 195 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 CPSF4LA6NMK7 179 aaKnown RBP9.2□□□□□ -0.94
CAPN3-204ENST00000356316 LRRN3E7EW58 273 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 M0R233 179 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 M0R3H8 397 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 TPST2O60704 377 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 FARS2O95363 451 aaKnown RBP9.2□□□□□ -0.94
CAPN3-204ENST00000356316 CH25HO95992 272 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 OR8G3PP0DMU2 310 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 UMPSP11172 480 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 B4GALT1P15291 398 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 CD247P20963 164 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 IGFBP5P24593 272 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 GLRXP35754 106 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 SRP14P37108 136 aaKnown RBP9.2□□□□□ -0.94
CAPN3-204ENST00000356316 GIPRP48546 466 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 NFYCQ13952 458 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 LINC00114Q6XXX2 140 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 IL17RELQ6ZVW7 336 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 SLC35D2Q76EJ3 337 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 ZNF627Q7L945 461 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 PATL1Q86TB9 770 aaKnown RBP9.2□□□□□ -0.94
CAPN3-204ENST00000356316 CDK20Q8IZL9 346 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 LINC01356Q8N9X3 169 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 VANGL1Q8TAA9 524 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-204ENST00000356316 ZNF566Q969W8 418 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 MRPL24Q96A35 216 aaKnown RBP9.2□□□□□ -0.94
CAPN3-204ENST00000356316 SNX18Q96RF0 628 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 ARHGDIGQ99819 225 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 FOXB1Q99853 325 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 CPPED1Q9BRF8 314 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-204ENST00000356316 TPK1Q9H3S4 243 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 RNF121Q9H920 327 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 GLTPQ9NZD2 209 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 DUSP13Q9UII6 198 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 GPR160Q9UJ42 338 aa9.2□□□□□ -0.94
CAPN3-204ENST00000356316 A0A1W2PPW3 197 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 SLC22A23A1A5C7 686 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 TRAPPC13A5PLN9 417 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 HMGB1P1B2RPK0 211 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-204ENST00000356316 KPNA4O00629 521 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-204ENST00000356316 PTHP01270 115 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 ZNF35P13682 527 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 ZNF14P17017 642 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-204ENST00000356316 PCMT1P22061 227 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 PCBP3P57721 371 aaKnown RBP9.19□□□□□ -0.94
CAPN3-204ENST00000356316 MTPNP58546 118 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 ZP4Q12836 540 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 CR1LQ2VPA4 569 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 TMEM53Q6P2H8 277 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 PTOV1Q86YD1 416 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 SKA3Q8IX90 412 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 SLC22A24Q8N4F4 322 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 DPP10Q8N608 796 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 OR6T1Q8NGN1 323 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 OR6X1Q8NH79 312 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 ADAMTS16Q8TE57 1224 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 TSPEARQ8WU66 669 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 THOC1Q96FV9 657 aaKnown RBP9.19□□□□□ -0.94
CAPN3-204ENST00000356316 SLC25A44Q96H78 314 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-204ENST00000356316 MPP4Q96JB8 637 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 MAGEB18Q96M61 343 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 CGREF1Q99674 301 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 SH3GL1Q99961 368 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 SYT3Q9BQG1 590 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 WFDC6Q9BQY6 131 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 SLC19A3Q9BZV2 496 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 LRMDAQ9H2I8 198 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 SLC7A8Q9UHI5 535 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 TMEFF2Q9UIK5 374 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-204ENST00000356316 ZNF346Q9UL40 294 aaKnown RBP9.19□□□□□ -0.94
CAPN3-204ENST00000356316 SLC7A7Q9UM01 511 aa9.19□□□□□ -0.94
CAPN3-204ENST00000356316 LYNX1G3V0Z9 82 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 BLOC1S5-TXNDC5H3BN57 136 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 LILRA1O75019 489 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 BCL10O95999 233 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 OPN1SWP03999 348 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 SERPINA5P05154 406 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 TACSTD2P09758 323 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 LYNX1P0DP58 116 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 TCN1P20061 433 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-204ENST00000356316 ZNF84P51523 738 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 CLRN1P58418 232 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 PLP2Q04941 152 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 CYLC2Q14093 348 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-204ENST00000356316 RAB39AQ14964 217 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 ZNF74Q16587 644 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 SLC36A2Q495M3 483 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 METTL21CQ5VZV1 264 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 NHLRC1Q6VVB1 395 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 DPPA2Q7Z7J5 298 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 OR1J2Q8NGS2 313 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 OR10A6Q8NH74 314 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 RDH5Q92781 318 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 TMEM54Q969K7 222 aa9.18□□□□□ -0.94
CAPN3-204ENST00000356316 SIKE1Q9BRV8 207 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms