RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 RAB40AQ8WXH6 277 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 NSMAFQ92636 917 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 PDCD10Q9BUL8 212 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 TMEM231Q9H6L2 316 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 STEAP1Q9UHE8 339 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 SLC22A13Q9Y226 551 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 PLEKHA6Q9Y2H5 1048 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 SEC16AO15027 2179 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 GGT3PA6NGU5 568 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 HMSDA8MTL9 139 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 H0YGG7 62 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ZNF749O43361 778 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 RDH16O75452 317 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 IGFALSP35858 605 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ADPRHP54922 357 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ARF3P61204 181 aaPredicted RBP9.22□□□□□ -0.93
PTPRA-203ENST00000356147 SERTAD2Q14140 314 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 NR0B2Q15466 257 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 GUCA2BQ16661 112 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 PDSS1Q5T2R2 415 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ENPP7Q6UWV6 458 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 CD163Q86VB7 1156 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 STEAP2Q8NFT2 490 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 OR4S1Q8NGB4 309 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 SERINC2Q96SA4 455 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 DUSP22Q9NRW4 184 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 SLC39A1Q9NY26 324 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ERVK-19Q9WJR5 959 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 TBC1D3DA0A087WVF3 549 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 TBC1D3IA0A087WXS9 549 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 FITM1A5D6W6 292 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 TBC1D3LB9A6J9 549 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 AKR7A3O95154 331 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 PLGP00747 810 aaPredicted RBP9.21□□□□□ -0.93
PTPRA-203ENST00000356147 TBC1D3HP0C7X1 549 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 CTNNB1P35222 781 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 ACTR1BP42025 376 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 CTXN1P60606 82 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 ACTR1AP61163 376 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 UBE2IP63279 158 aaKnown RBP9.21□□□□□ -0.93
PTPRA-203ENST00000356147 OR7A5Q15622 319 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 LY6G6FQ5SQ64 297 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 FCRL6Q6DN72 434 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 TBC1D3CQ6IPX1 549 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 STEAP1BQ6NZ63 245 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 RHOUQ7L0Q8 258 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 TBC1D3Q8IZP1 549 aaPredicted RBP9.21□□□□□ -0.93
PTPRA-203ENST00000356147 C2CD4CQ8TF44 421 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 FAM3CQ92520 227 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 CCDC74AQ96AQ1 378 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 PAWRQ96IZ0 340 aaKnown RBP9.21□□□□□ -0.93
PTPRA-203ENST00000356147 NKX6-2Q9C056 277 aaPredicted RBP9.21□□□□□ -0.93
PTPRA-203ENST00000356147 APMAPQ9HDC9 416 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 ASF1BQ9NVP2 202 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 CGGBP1Q9UFW8 167 aaPredicted RBP9.21□□□□□ -0.93
PTPRA-203ENST00000356147 LAMP5Q9UJQ1 280 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 SLC6A5Q9Y345 797 aa9.21□□□□□ -0.93
PTPRA-203ENST00000356147 LINC01387J3KSC0 135 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 XRCC3O43542 346 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 GPR75O95800 540 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 CSTAP01040 98 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 AMY2AP04746 511 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 OR4E1P0C645 316 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 LINC00271P0C7V0 271 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 FAUP35544 74 aaKnown RBP9.21□□□□□ -0.94
PTPRA-203ENST00000356147 LSSP48449 732 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 RPS15AP62244 130 aaKnown RBP9.21□□□□□ -0.94
PTPRA-203ENST00000356147 MGAT2Q10469 447 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 C2orf76Q3KRA6 126 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 C2orf27AQ580R0 203 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 SHEQ5VZ18 495 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 JAZF1Q86VZ6 243 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 ZNF227Q86WZ6 799 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 ZFP82Q8N141 532 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 METTL27Q8N6F8 245 aaPredicted RBP9.21□□□□□ -0.94
PTPRA-203ENST00000356147 OR1S2Q8NGQ3 325 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 FAM174AQ8TBP5 190 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 RAB11FIP5Q9BXF6 653 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 HDAC8Q9BY41 377 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 MAFFQ9ULX9 164 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 NOP16Q9Y3C1 178 aaKnown RBP9.21□□□□□ -0.94
PTPRA-203ENST00000356147 WDR87Q6ZQQ6 2873 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 SDK1Q7Z5N4 2213 aa9.21□□□□□ -0.94
PTPRA-203ENST00000356147 ASCC3Q8N3C0 2202 aaKnown RBP9.2□□□□□ -0.94
PTPRA-203ENST00000356147 OR5H14A6NHG9 310 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 OIP5O43482 229 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 SULT1B1O43704 296 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 ZNF254O75437 659 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 SLC25A12O75746 678 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 ATG12O94817 140 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 GLCEO94923 617 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 HLA-DQA2P01906 255 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 CALCBP10092 127 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 PRSS3P35030 304 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 SRSF3P84103 164 aaKnown RBP9.2□□□□□ -0.94
PTPRA-203ENST00000356147 ULK3Q6PHR2 472 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 FIGLAQ6QHK4 219 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 MDGA2Q7Z553 956 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 PRSS35Q8N3Z0 413 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 C12orf45Q8N5I9 185 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms