RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 PRSS53Q2L4Q9 553 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 XKR4Q5GH76 650 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 ZNF697Q5TEC3 545 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 TPGS2Q68CL5 300 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 GALNT16Q8N428 558 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 TRAM1L1Q8N609 369 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 M1APQ8TC57 530 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 AUTS2Q8WXX7 1259 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 RGP1Q92546 391 aaPredicted RBP14.38□□□□□ -0.11
RTN3-205ENST00000356000 MIB2Q96AX9 1013 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 SHPKQ9UHJ6 478 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 GAB2Q9UQC2 676 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 CDHR4A6H8M9 788 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 AGPAT2O15120 278 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 HIST1H2BKO60814 126 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 HIST1H2BJP06899 126 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 METTL15P1P0C7V9 234 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 FABP4P15090 132 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 HIST1H2BOP23527 126 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 HTR2CP28335 458 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 PYCR1P32322 319 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 HIST1H2BBP33778 126 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 OMPP47874 163 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 SLC6A9P48067 706 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 PNLIPRP1P54315 467 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 HIST1H2BDP58876 126 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 RPS11P62280 158 aaKnown RBP eCLIP14.37□□□□□ -0.11
RTN3-205ENST00000356000 HIST1H2BCP62807 126 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 HIST2H2BEQ16778 126 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 ISXQ2M1V0 245 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.37□□□□□ -0.11
RTN3-205ENST00000356000 HIST1H2BHQ93079 126 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 KISS1RQ969F8 398 aaPredicted RBP14.37□□□□□ -0.11
RTN3-205ENST00000356000 INSM2Q96T92 566 aaPredicted RBP14.37□□□□□ -0.11
RTN3-205ENST00000356000 HIST1H2BNQ99877 126 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 HIST1H2BMQ99879 126 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 MRI1Q9BV20 369 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 SLC12A9Q9BXP2 914 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 CXorf36Q9H7Y0 433 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 PRSS47A8MTI9 375 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 H0YIV9 168 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 OGG1O15527 345 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 KCNAB3O43448 404 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 ADAP1O75689 374 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 CALCBP10092 127 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 MAOAP21397 527 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 CLDN12P56749 244 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 ZNF85Q03923 595 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 FBXL22Q6P050 247 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 SLC39A5Q6ZMH5 540 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 OR1J2Q8NGS2 313 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 ASB17Q8WXJ9 295 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 MR1Q95460 341 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 NEURL3Q96EH8 262 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 OR14A2Q96R54 314 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 TRPV4Q9HBA0 871 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 NCDNQ9UBB6 729 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 OR14J1Q9UGF5 321 aa14.37□□□□□ -0.11
RTN3-205ENST00000356000 OR1F1O43749 312 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 SPARCP09486 303 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 SRMP19623 302 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 PFN3P60673 137 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 JOSD1Q15040 202 aaPredicted RBP14.36□□□□□ -0.11
RTN3-205ENST00000356000 ODF4Q2M2E3 257 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 PDZD11Q5EBL8 140 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 UNQ9370/PRO34162Q6UXP9 181 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 GDPD4Q6W3E5 623 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 CD163Q86VB7 1156 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 HSD17B11Q8NBQ5 300 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 RAB8BQ92930 207 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 ZNF775Q96BV0 537 aaPredicted RBP14.36□□□□□ -0.11
RTN3-205ENST00000356000 NTNG2Q96CW9 530 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 ZNF350Q9GZX5 532 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 SPHK2Q9NRA0 654 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 FAM212BQ9NTI7 297 aaPredicted RBP14.36□□□□□ -0.11
RTN3-205ENST00000356000 PATJQ8NI35 1801 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 PTPRDP23468 1912 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 C9J4A7 227 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 PRAMEF26H0Y7S4 382 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 M0R143 59 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 PLGP00747 810 aaPredicted RBP14.36□□□□□ -0.11
RTN3-205ENST00000356000 GTF2F2P13984 249 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 AQP2P41181 271 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 DHRS2Q13268 280 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 FRMD1Q8N878 549 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 OR2T33Q8NG76 320 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 OR2A12Q8NGT7 310 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 EID2BQ96D98 161 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 WDR92Q96MX6 357 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 OR51B6Q9H340 312 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 DOCK3Q8IZD9 2030 aa14.36□□□□□ -0.11
RTN3-205ENST00000356000 GAPDHSO14556 408 aaPredicted RBP14.35□□□□□ -0.11
RTN3-205ENST00000356000 SMAD9O15198 467 aaKnown RBP14.35□□□□□ -0.11
RTN3-205ENST00000356000 OR2C1O95371 312 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 CST5P28325 142 aaPredicted RBP14.35□□□□□ -0.11
RTN3-205ENST00000356000 OR1E1P30953 314 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 DHPSP49366 369 aaPredicted RBP14.35□□□□□ -0.11
RTN3-205ENST00000356000 RPS23P62266 143 aaKnown RBP14.35□□□□□ -0.11
RTN3-205ENST00000356000 SYPL1Q16563 259 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 C9orf64Q5T6V5 341 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms