RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SIP14410 1827 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 LEUTXA8MZ59 168 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 FGF17O60258 216 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 CCR9P51686 369 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 MFSD12Q6NUT3 480 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 PXKQ7Z7A4 578 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 LRRC56Q8IYG6 542 aaPredicted RBP12.94□□□□□ -0.34
SREBF1-202ENST00000355815 TCTE3Q8IZS6 198 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 GPR148Q8TDV2 347 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 LINC00052Q96N35 136 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 KLK11Q9UBX7 282 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 A4GNTQ9UNA3 340 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 RHBDD3Q9Y3P4 386 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 CNOT1A5YKK6 2376 aaKnown RBP12.94□□□□□ -0.34
SREBF1-202ENST00000355815 PRAMEF25A6NGN4 478 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 HSPA12AO43301 675 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 NDUFB2O95178 105 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 GPR75O95800 540 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 OR7E24Q6IFN5 339 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF283Q8N7M2 679 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 CLRN3Q8NCR9 226 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 SERINC2Q96SA4 455 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 GMEB2Q9UKD1 530 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 SULT1C2O00338 296 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 DVL2O14641 736 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 EML2O95834 649 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 SOD1P00441 154 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 IFNA10P01566 189 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 IFNA4P05014 189 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 TRHRP34981 398 aaPredicted RBP12.93□□□□□ -0.34
SREBF1-202ENST00000355815 POU3F4P49335 361 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 KIAA0141Q14154 515 aaPredicted RBP12.93□□□□□ -0.34
SREBF1-202ENST00000355815 SSX1Q16384 188 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 SFRP5Q5T4F7 317 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 HIST2H3PS2Q5TEC6 136 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 NAA40Q86UY6 237 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 TMEM99Q8N816 258 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 NDUFB11Q9NX14 153 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 ALG10Q5BKT4 473 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 EOGTQ5NDL2 527 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 CARD17Q5XLA6 110 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 MEX3BQ6ZN04 569 aaKnown RBP12.93□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF619Q8N2I2 560 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 CHD5Q8TDI0 1954 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 KIAA1143Q96AT1 154 aaPredicted RBP12.93□□□□□ -0.34
SREBF1-202ENST00000355815 C10orf90Q96M02 699 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 C1QTNF2Q9BXJ5 285 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.93□□□□□ -0.34
SREBF1-202ENST00000355815 PLCXD1Q9NUJ7 323 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF629Q9UEG4 869 aaPredicted RBP12.93□□□□□ -0.34
SREBF1-202ENST00000355815 NME1P15531 152 aaKnown RBP12.93□□□□□ -0.34
SREBF1-202ENST00000355815 RPS2P15880 293 aaKnown RBP12.93□□□□□ -0.34
SREBF1-202ENST00000355815 CD79BP40259 229 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF425Q6IV72 752 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 TMEM81Q6P7N7 255 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 HSD17B11Q8NBQ5 300 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 SLC37A2Q8TED4 501 aa12.93□□□□□ -0.34
SREBF1-202ENST00000355815 NKX3-1Q99801 234 aaPredicted RBP12.93□□□□□ -0.34
SREBF1-202ENST00000355815 ISG20L2Q9H9L3 353 aaKnown RBP12.93□□□□□ -0.34
SREBF1-202ENST00000355815 TPOP07202 933 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 CCNOP22674 350 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 CTHP32929 405 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 DUSP2Q05923 314 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 RUNX2Q13950 521 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 CDONQ4KMG0 1287 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 AWAT2Q6E213 333 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 MCATQ8IVS2 390 aaKnown RBP12.92□□□□□ -0.34
SREBF1-202ENST00000355815 SUMF2Q8NBJ7 301 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 MFSD9Q8NBP5 474 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 OR5H2Q8NGV7 314 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 LILRB1Q8NHL6 650 aaPredicted RBP12.92□□□□□ -0.34
SREBF1-202ENST00000355815 DHCR7Q9UBM7 475 aaKnown RBP12.92□□□□□ -0.34
SREBF1-202ENST00000355815 ADAM18Q9Y3Q7 739 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 TRIM77I1YAP6 450 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 RGS13O14921 159 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 OR13C7P0DN81 318 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 GLULP15104 373 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 CXCL3P19876 107 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 DCTDP32321 178 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 MTNR1BP49286 362 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 RIDAP52758 137 aaKnown RBP12.92□□□□□ -0.34
SREBF1-202ENST00000355815 MVDP53602 400 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 EPHA4P54764 986 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 COX15Q7KZN9 410 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 WDR89Q96FK6 387 aaPredicted RBP12.92□□□□□ -0.34
SREBF1-202ENST00000355815 OR5B12Q96R08 314 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 NMNAT3Q96T66 252 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 SDF2Q99470 211 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 GPA33Q99795 319 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 DOCK4Q8N1I0 1966 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 INHBBP09529 407 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 PRKAR1BP31321 381 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 GLP1RP43220 463 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 SIRPAP78324 504 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 NSDHLQ15738 373 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 TPRA1Q86W33 373 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 OR4N2Q8NGD1 307 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 OR5M1Q8NGP8 315 aa12.92□□□□□ -0.34
SREBF1-202ENST00000355815 KCTD12Q96CX2 325 aaKnown RBP12.92□□□□□ -0.34
SREBF1-202ENST00000355815 MAP3K3Q99759 626 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms