RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 SELPP16109 830 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 SPI1P17947 270 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 VAMP1P23763 118 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 CASRP41180 1078 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 MECP2P51608 486 aaKnown RBP13.55□□□□□ -0.24
CLCN1-201ENST00000343257 RIPPLY1Q0D2K3 151 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 ALG10BQ5I7T1 473 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 DHRS7BQ6IAN0 325 aaPredicted RBP13.55□□□□□ -0.24
CLCN1-201ENST00000343257 FAM122BQ7Z309 247 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 OR4K14Q8NGD5 310 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 PPP1R14AQ96A00 147 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 INSM2Q96T92 566 aaPredicted RBP13.55□□□□□ -0.24
CLCN1-201ENST00000343257 EPHX3Q9H6B9 360 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 HAO2Q9NYQ3 351 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 FRRS1LQ9P0K9 344 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 SNRNP200O75643 2136 aaKnown RBP13.55□□□□□ -0.24
CLCN1-201ENST00000343257 A0A1W2PPE3 182 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 BLOC1S5-TXNDC5H3BN57 136 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 PGAM2P15259 253 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 MAPK3P27361 379 aaPredicted RBP13.55□□□□□ -0.24
CLCN1-201ENST00000343257 MNDAP41218 407 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 RAB33AQ14088 237 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 Q499Y3 187 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 DEFB134Q4QY38 66 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 SLC29A4Q7RTT9 530 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 RNF113BQ8IZP6 322 aaKnown RBP13.55□□□□□ -0.24
CLCN1-201ENST00000343257 LRRC25Q8N386 305 aaPredicted RBP13.55□□□□□ -0.24
CLCN1-201ENST00000343257 PLPP7Q8NBV4 271 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 INO80EQ8NBZ0 244 aaPredicted RBP13.55□□□□□ -0.24
CLCN1-201ENST00000343257 C14orf79Q96F83 325 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 CMTM3Q96MX0 182 aa13.55□□□□□ -0.24
CLCN1-201ENST00000343257 NUP210Q8TEM1 1887 aaPredicted RBP13.54□□□□□ -0.24
CLCN1-201ENST00000343257 TRBV23OR9-2A0A075B6M9 112 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 ELOA3DA6NLF2 546 aaPredicted RBP13.54□□□□□ -0.24
CLCN1-201ENST00000343257 SOD2P04179 222 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 EPCAMP16422 314 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 GABRA3P34903 492 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 SLC7A9P82251 487 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 ELOA3BQ3SY89 546 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 LEG1Q6P5S2 330 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 C10orf53Q8N6V4 93 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 ELOA3Q8NG57 546 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 OR2L5Q8NG80 312 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 OR4A4PQ8NGN8 299 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 TCEAL3Q969E4 200 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 ZBTB8AQ96BR9 441 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 MENTQ9BUN1 341 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 TINAGQ9UJW2 476 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 C5orf51A6NDU8 294 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 GPRIN2O60269 458 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 SNAPINO95295 136 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 ZNF888P0CJ79 500 aaPredicted RBP13.54□□□□□ -0.24
CLCN1-201ENST00000343257 DIO1P49895 249 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 EMDP50402 254 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 PRKXP51817 358 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 ILF3Q12906 894 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLCN1-201ENST00000343257 DUSP8Q13202 625 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 SQSTM1Q13501 440 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 HABP2Q14520 560 aaPredicted RBP13.54□□□□□ -0.24
CLCN1-201ENST00000343257 PEA15Q15121 130 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 RPL13AP3Q6NVV1 102 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 ENPP7Q6UWV6 458 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 NRROSQ86YC3 692 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 SLC35F3Q8IY50 421 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 ZNF619Q8N2I2 560 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 OR1J4Q8NGS1 313 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 OR6S1Q8NH40 331 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 SLC2A12Q8TD20 617 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 TSEN15Q8WW01 171 aaKnown RBP13.54□□□□□ -0.24
CLCN1-201ENST00000343257 SFXN1Q9H9B4 322 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 PRMT8Q9NR22 394 aaPredicted RBP13.54□□□□□ -0.24
CLCN1-201ENST00000343257 GHRLQ9UBU3 117 aa13.54□□□□□ -0.24
CLCN1-201ENST00000343257 C17orf113A0A1B0GUU1 675 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 FITM1A5D6W6 292 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 CPMP14384 443 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 NID1P14543 1247 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 GAS6Q14393 721 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 MLF2Q15773 248 aaPredicted RBP13.53□□□□□ -0.24
CLCN1-201ENST00000343257 NNATQ16517 81 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 C2orf76Q3KRA6 126 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 ARHGAP11BQ3KRB8 267 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 ATPAF1Q5TC12 328 aaPredicted RBP13.53□□□□□ -0.24
CLCN1-201ENST00000343257 LRRC69Q6ZNQ3 347 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 TMPPEQ6ZT21 453 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 ACOT7LQ6ZUV0 252 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 ARMC10Q8N2F6 343 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 OR4E2Q8NGC2 313 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 ELP5Q8TE02 316 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 CCDC107Q8WV48 283 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 SPHK2Q9NRA0 654 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 PTAFRP25105 342 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 PBX2P40425 430 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 PLAURQ03405 335 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 MPPED2Q15777 294 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 MICBQ29980 383 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 GFOD2Q3B7J2 385 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 FAM220AQ7Z4H9 259 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 NRSN1Q8IZ57 195 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 TMIEQ8NEW7 156 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 OR5M8Q8NGP6 311 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms