RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ZNF585AQ6P3V2 769 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 KIRREL2Q6UWL6 708 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 HPSE2Q8WWQ2 592 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 AUTS2Q8WXX7 1259 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 SUSD6Q92537 303 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 GHSRQ92847 366 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 C4orf36Q96KX1 117 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 URM1Q9BTM9 101 aaKnown RBP8.83□□□□□ -1
PTCHD4-201ENST00000339488 CXXC1Q9P0U4 656 aaPredicted RBP8.83□□□□□ -1
PTCHD4-201ENST00000339488 NPFFR2Q9Y5X5 522 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 A0A087WV48 116 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 C13orf42A0A1B0GVH6 325 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 SYNDIG1LA6NDD5 238 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 TMEM210A6NLX4 147 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 ANKRD36A6QL64 1941 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 TDRD15B5MCY1 1934 aaKnown RBP8.82□□□□□ -1
PTCHD4-201ENST00000339488 FAAHO00519 579 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 AQP7O14520 342 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 ZNF208O43345 1280 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 ZNF432O94892 652 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 FCGR3AP08637 254 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 GTF2F2P13984 249 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 PYCR1P32322 319 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 CDK5Q00535 292 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 FAM83HQ6ZRV2 1179 aaPredicted RBP8.82□□□□□ -1
PTCHD4-201ENST00000339488 Q6ZVH6 145 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 PAQR9Q6ZVX9 377 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 GLT6D1Q7Z4J2 308 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 GKN2Q86XP6 184 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 ANGPTL5Q86XS5 388 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 C11orf42Q8N5U0 333 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 ZNF615Q8N8J6 731 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 OR5R1Q8NH85 324 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 SPPL3Q8TCT6 385 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 MITD1Q8WV92 249 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 STACQ99469 402 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 S100A13Q99584 98 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 SMOQ99835 787 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 TMEM106CQ9BVX2 250 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 KCNK15Q9H427 330 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 TRPC4Q9UBN4 977 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 SH3BGRL2Q9UJC5 107 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 CSAG2Q9Y5P2 127 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 KPTNQ9Y664 436 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 M0QYG6 137 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 MASP2O00187 686 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 EFSO43281 561 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 SMAD6O43541 496 aaKnown RBP8.82□□□□□ -1
PTCHD4-201ENST00000339488 XRCC3O43542 346 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 FRS3O43559 492 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 ZNF821O75541 412 aaPredicted RBP8.82□□□□□ -1
PTCHD4-201ENST00000339488 ETHE1O95571 254 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 PTBP3O95758 552 aaKnown RBP8.82□□□□□ -1
PTCHD4-201ENST00000339488 MT-ND5P03915 603 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 CD3DP04234 171 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 CHRM4P08173 479 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 SCNN1AP37088 669 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 SRSF11Q05519 484 aaKnown RBP8.82□□□□□ -1
PTCHD4-201ENST00000339488 UBE2V2Q15819 145 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 MAPK14Q16539 360 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 ZXDCQ2QGD7 858 aaPredicted RBP8.82□□□□□ -1
PTCHD4-201ENST00000339488 MRM1Q6IN84 353 aaKnown RBP8.82□□□□□ -1
PTCHD4-201ENST00000339488 TMEM108Q6UXF1 575 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 Q6ZRG5 221 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 OR5M8Q8NGP6 311 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 PIGXQ8TBF5 258 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 ARRDC2Q8TBH0 407 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 CASTOR1Q8WTX7 329 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 NEIL2Q969S2 332 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 RCC1LQ96I51 464 aaKnown RBP8.82□□□□□ -1
PTCHD4-201ENST00000339488 FCRL2Q96LA5 508 aaPredicted RBP8.82□□□□□ -1
PTCHD4-201ENST00000339488 HCAR1Q9BXC0 346 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 CIPCQ9C0C6 399 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 PLEKHA1Q9HB21 404 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 CYTL1Q9NRR1 136 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 KLK14Q9P0G3 267 aa8.82□□□□□ -1
PTCHD4-201ENST00000339488 DAPL1A0PJW8 107 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 RPL36A-HNRNPH2H7BZ11 118 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 SAP18O00422 153 aaKnown RBP8.81□□□□□ -1
PTCHD4-201ENST00000339488 CTDSPLO15194 276 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 GRM6O15303 877 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 NME2P1O60361 137 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 RDH16O75452 317 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 F3P13726 295 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 ARF4P18085 180 aaPredicted RBP8.81□□□□□ -1
PTCHD4-201ENST00000339488 CD34P28906 385 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 PPP2R1BP30154 601 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 PGFP49763 221 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 ERVFRD-1P60508 538 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 SNRPNP63162 240 aaKnown RBP8.81□□□□□ -1
PTCHD4-201ENST00000339488 UPP1Q16831 310 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 HENMT1Q5T8I9 393 aaKnown RBP8.81□□□□□ -1
PTCHD4-201ENST00000339488 TANGO2Q6ICL3 276 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 CAMKMTQ7Z624 323 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 SLC35F3Q8IY50 421 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 PNLDC1Q8NA58 520 aaKnown RBP8.81□□□□□ -1
PTCHD4-201ENST00000339488 OR4K14Q8NGD5 310 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 ABHD5Q8WTS1 349 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 LCN9Q8WX39 176 aa8.81□□□□□ -1
PTCHD4-201ENST00000339488 KLK6Q92876 244 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms