RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CBX5P45973 191 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 P2RX1P51575 399 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 HNRNPKP61978 463 aaKnown RBP eCLIP17.1■□□□□ 0.33
PSPC1-201ENST00000338910 MELKQ14680 651 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 EIPR1Q53HC9 387 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 ZCCHC12Q6PEW1 402 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 SOHLH2Q9NX45 425 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 TAS2R10Q9NYW0 307 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 SIGLEC7Q9Y286 467 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 SIT1Q9Y3P8 196 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 EML5Q05BV3 1969 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 IGHV5-51A0A0C4DH38 117 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 TRAPPC13A5PLN9 417 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 IFITM5A6NNB3 132 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 RIIAD1A6NNX1 92 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 K7ESF4 209 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 SIX6O95475 246 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 VSIG10L2P0DP72 767 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 RNH1P13489 461 aaKnown RBP17.09■□□□□ 0.33
PSPC1-201ENST00000338910 HTR2AP28223 471 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 HCCSP53701 268 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 OC90Q02509 493 aaPredicted RBP17.09■□□□□ 0.33
PSPC1-201ENST00000338910 C2orf68Q2NKX9 166 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 RPL13AP3Q6NVV1 102 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 UNQ9370/PRO34162Q6UXP9 181 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 FCRLAQ7L513 359 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 RANBP3LQ86VV4 465 aaPredicted RBP17.09■□□□□ 0.33
PSPC1-201ENST00000338910 RNF113BQ8IZP6 322 aaKnown RBP17.09■□□□□ 0.33
PSPC1-201ENST00000338910 ZNF614Q8N883 585 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 OR4N2Q8NGD1 307 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 OR5T2Q8NGG2 359 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 OR13C2Q8NGS9 318 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 TMEM239Q8WW34 195 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 SAV1Q9H4B6 383 aaPredicted RBP17.09■□□□□ 0.33
PSPC1-201ENST00000338910 THADAQ6YHU6 1953 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 PCDH15Q96QU1 1955 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 ZNF98A6NK75 572 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 SRMP19623 302 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 S1PR1P21453 382 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 RPS4Y1P22090 263 aaKnown RBP17.09■□□□□ 0.33
PSPC1-201ENST00000338910 RGS19P49795 217 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 SIRPAP78324 504 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 PABPC1L2AQ5JQF8 200 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 OR7E24Q6IFN5 339 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 DNAAF1Q8NEP3 725 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 MMABQ96EY8 250 aaPredicted RBP17.09■□□□□ 0.33
PSPC1-201ENST00000338910 LRRC46Q96FV0 321 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 FOXJ3Q9UPW0 622 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 WDR87Q6ZQQ6 2873 aa17.09■□□□□ 0.33
PSPC1-201ENST00000338910 LMO7DNF2Z398 122 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 PYCARD-AS1I3L0S3 204 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 BRINP1O60477 761 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 PTHLHP12272 177 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 PSG6Q00889 435 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 POU4F2Q12837 409 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 SLC36A1Q7Z2H8 476 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 SYS1Q8N2H4 156 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 OR6K3Q8NGY3 331 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 ORAI1Q96D31 301 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 PDCD1LG2Q9BQ51 273 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 GINS4Q9BRT9 223 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.08■□□□□ 0.33
PSPC1-201ENST00000338910 NOX4Q9NPH5 578 aa17.08■□□□□ 0.33
PSPC1-201ENST00000338910 SIGLEC5O15389 551 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 PIN1P1O15428 100 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 LYPD3O95274 346 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 IGF2P01344 180 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 RLN2P04090 185 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 ZNF35P13682 527 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 MAOAP21397 527 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 MST1P26927 711 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 MRPS10P82664 201 aaKnown RBP17.08■□□□□ 0.32
PSPC1-201ENST00000338910 SIGLEC14Q08ET2 396 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 OR1Q1Q15612 314 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 PDSS1Q5T2R2 415 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 STPG1Q5TH74 334 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 FRYLO94915 3013 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 ASXL3Q9C0F0 2248 aa17.08■□□□□ 0.32
PSPC1-201ENST00000338910 ZNF879B4DU55 563 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 NKX2-2O95096 273 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 CD1AP06126 327 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 ZNF3P17036 446 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 MAPK3P27361 379 aaPredicted RBP17.07■□□□□ 0.32
PSPC1-201ENST00000338910 MPGP29372 298 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 EMDP50402 254 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 TSSK4Q6SA08 328 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 TMPRSS11FQ6ZWK6 438 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 OR4C6Q8NH72 309 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 CCDC86Q9H6F5 360 aaKnown RBP17.07■□□□□ 0.32
PSPC1-201ENST00000338910 PRTFDC1Q9NRG1 225 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 DTX4Q9Y2E6 619 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 TMEM184BQ9Y519 407 aaPredicted RBP17.07■□□□□ 0.32
PSPC1-201ENST00000338910 TRBV2A0A0J9YWF9 115 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 ACOT7O00154 380 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 CTNSO60931 367 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 ACTA2P62736 377 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 RPS15P62841 145 aaKnown RBP17.07■□□□□ 0.32
PSPC1-201ENST00000338910 ACTG2P63267 376 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 CBFBQ13951 182 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 KCNAB1Q14722 419 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms