RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 TMEM14AQ9Y6G1 99 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 SMLR1H3BR10 107 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 XKRYO14609 159 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 PLGP00747 810 aaPredicted RBP13.16□□□□□ -0.3
TPM3-206ENST00000330188 GDNFP39905 211 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 DYRK1AQ13627 763 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 ACKR1Q16570 336 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 FAM69AQ5T7M9 428 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 LINGO2Q7L985 606 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 LRRTM1Q86UE6 522 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 SIX5Q8N196 739 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 ZNF519Q8TB69 540 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 THEM6Q8WUY1 208 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 NSMAFQ92636 917 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 CCDC74AQ96AQ1 378 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 AMELYQ99218 206 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 GTPBP2Q9BX10 602 aaKnown RBP13.16□□□□□ -0.3
TPM3-206ENST00000330188 CACNG6Q9BXT2 260 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 TAS2R10Q9NYW0 307 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 COPZ2Q9P299 210 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 OR5V1Q9UGF6 321 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 KCNG2Q9UJ96 466 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 ING1Q9UK53 422 aaPredicted RBP13.16□□□□□ -0.3
TPM3-206ENST00000330188 EXPH5Q8NEV8 1989 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 IGHV3-20A0A0C4DH32 117 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 A8MVM7 634 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 PHYHO14832 338 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 ZNF254O75437 659 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 DXOO77932 396 aaKnown RBP13.15□□□□□ -0.3
TPM3-206ENST00000330188 MT-ND4P03905 459 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 CCR6P51684 374 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 RPL27P61353 136 aaKnown RBP13.15□□□□□ -0.3
TPM3-206ENST00000330188 SHBQ15464 509 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 FCN2Q15485 313 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 C1orf140Q5VVS0 124 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 PWWP2BQ6NUJ5 590 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 LRRC69Q6ZNQ3 347 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 GRINAQ7Z429 371 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 PRSS35Q8N3Z0 413 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 OTOSQ8NHW6 89 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 SLITRK2Q9H156 845 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 PLEKHA1Q9HB21 404 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 SLCO1C1Q9NYB5 712 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 B9D1Q9UPM9 204 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 FKBP7Q9Y680 259 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 MYO15AQ9UKN7 3530 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 TRBV5-7A0A0A0MS05 114 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 PRSS37A4D1T9 235 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 HSPB2A8KAH6 182 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 CALCBP10092 127 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 HSPB2Q16082 182 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 PLCZ1Q86YW0 608 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 SERPINA12Q8IW75 414 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 ZNF676Q8N7Q3 588 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 OR10AC1Q8NH08 325 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 LILRB4Q8NHJ6 448 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 STT3BQ8TCJ2 826 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 DUSP19Q8WTR2 217 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 GCDHQ92947 438 aaPredicted RBP13.15□□□□□ -0.3
TPM3-206ENST00000330188 SHDQ96IW2 340 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 MRI1Q9BV20 369 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 TGIF2Q9GZN2 237 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 MED28Q9H204 178 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 WNT16Q9UBV4 365 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 FOXJ3Q9UPW0 622 aa13.15□□□□□ -0.3
TPM3-206ENST00000330188 ARID1BQ8NFD5 2236 aaPredicted RBP13.14□□□□□ -0.31
TPM3-206ENST00000330188 TMEM212A6NML5 194 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 ZNF432O94892 652 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 KIR3DL2P43630 455 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 RNF4P78317 190 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 INSM1Q01101 510 aaPredicted RBP13.14□□□□□ -0.31
TPM3-206ENST00000330188 SNTB2Q13425 540 aaKnown RBP13.14□□□□□ -0.31
TPM3-206ENST00000330188 OTPQ5XKR4 325 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 FAM205BPQ63HN1 556 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 SLC22A10Q63ZE4 541 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 RHBDD2Q6NTF9 364 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 C16orf47Q6ZP98 133 aaPredicted RBP13.14□□□□□ -0.31
TPM3-206ENST00000330188 KANSL1Q7Z3B3 1105 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 TMPRSS9Q7Z410 1059 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 SYNPRQ8TBG9 265 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 STK35Q8TDR2 534 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 C4orf45Q96LM5 186 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 FOXN4Q96NZ1 517 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 OR11A1Q9GZK7 315 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 COMMD4Q9H0A8 199 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 DUSP15Q9H1R2 295 aaPredicted RBP13.14□□□□□ -0.31
TPM3-206ENST00000330188 TXNIPQ9H3M7 391 aa13.14□□□□□ -0.31
TPM3-206ENST00000330188 VSX1Q9NZR4 365 aaPredicted RBP13.14□□□□□ -0.31
TPM3-206ENST00000330188 TRAV8-7A0A075B6U6 113 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 IGLV1-36A0A0B4J1U3 117 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 GABARAPH6UMI1 98 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 PLPP3O14495 311 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 IGHMP01871 453 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 STOMP27105 288 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 PTH2RP49190 550 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 COL28A1Q2UY09 1125 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 WDR45BQ5MNZ6 344 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 BTN2A1Q7KYR7 527 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 DND1Q8IYX4 353 aaKnown RBP13.13□□□□□ -0.31
TPM3-206ENST00000330188 DNAAF1Q8NEP3 725 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms