RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 CA10Q9NS85 328 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 PIPOXQ9P0Z9 390 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 WDFY4Q6ZS81 3184 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 C10orf142B7Z368 130 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 NDUFB6O95139 128 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 ALDOBP05062 364 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 ITPKBP27987 946 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 PSMA6P60900 246 aaKnown RBP13.95□□□□□ -0.18
BRCC3-201ENST00000330045 SKP2Q13309 424 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 IDO2Q6ZQW0 420 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 ZSCAN1Q8NBB4 408 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 OR6N2Q8NGY6 317 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 LRRC20Q8TCA0 184 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 MMABQ96EY8 250 aaPredicted RBP13.95□□□□□ -0.18
BRCC3-201ENST00000330045 UTP23Q9BRU9 249 aaKnown RBP13.95□□□□□ -0.18
BRCC3-201ENST00000330045 FRYLO94915 3013 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 MPDZO75970 2070 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 TRAV8-7A0A075B6U6 113 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 SPTY2D1-AS1A0A0U1RR47 76 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 SCDO00767 359 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 GLSO94925 669 aaPredicted RBP13.94□□□□□ -0.18
BRCC3-201ENST00000330045 CLPSP04118 112 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 IL5P05113 134 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 GIPP09681 153 aaPredicted RBP13.94□□□□□ -0.18
BRCC3-201ENST00000330045 SPTBP11277 2137 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 C4BPBP20851 252 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 HSD17B7P56937 341 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 RPL18Q07020 188 aaKnown RBP13.94□□□□□ -0.18
BRCC3-201ENST00000330045 RIPPLY1Q0D2K3 151 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 OPCMLQ14982 345 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 MESTQ5EB52 335 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 EMC4Q5J8M3 183 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 ZNF626Q68DY1 528 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 DEFB119Q8N690 84 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 METTL27Q8N6F8 245 aaPredicted RBP13.94□□□□□ -0.18
BRCC3-201ENST00000330045 ZNF676Q8N7Q3 588 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 OR2G2Q8NGZ5 317 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 TPSD1Q9BZJ3 242 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 GSX2Q9BZM3 304 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 COMMD4Q9H0A8 199 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 WDR76Q9H967 626 aa13.94□□□□□ -0.18
BRCC3-201ENST00000330045 OR4C45A6NMZ5 311 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 SNRPGP15A8MWD9 76 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 B4DGG1 531 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 ZNF264O43296 627 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 TPPPO94811 219 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 ZNF432O94892 652 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 IGHV4-34P06331 123 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 MST1P26927 711 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 MECP2P51608 486 aaKnown RBP13.93□□□□□ -0.18
BRCC3-201ENST00000330045 FZD2Q14332 565 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 DNM1P46Q6ZS02 220 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 DPY19L4Q7Z388 723 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 SDR16C5Q8N3Y7 309 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 ZNF417Q8TAU3 575 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 TMEM106AQ96A25 262 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 KTI12Q96EK9 354 aaPredicted RBP13.93□□□□□ -0.18
BRCC3-201ENST00000330045 TSPAN32Q96QS1 320 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 MAP3K3Q99759 626 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 WDR87Q6ZQQ6 2873 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 TRBV5-7A0A0A0MS05 114 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 ZNF254O75437 659 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 RBBP9O75884 186 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 AKR7A3O95154 331 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 THEGLP0DJG4 465 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 RRASP10301 218 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 ZNF250P15622 560 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 ALOX5APP20292 161 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 RAP2BP61225 183 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 DHODHQ02127 395 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 PLA2G7Q13093 441 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 AANATQ16613 207 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 KANSL1Q7Z3B3 1105 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 ZNF227Q86WZ6 799 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 GLB1L2Q8IW92 636 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 OR10AC1Q8NH08 325 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 GPR148Q8TDV2 347 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 ZNF524Q96C55 264 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 KLHL15Q96M94 604 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 EXOSC3Q9NQT5 275 aaKnown RBP13.93□□□□□ -0.18
BRCC3-201ENST00000330045 KCNN3Q9UGI6 736 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 STEAP1Q9UHE8 339 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 NUP50Q9UKX7 468 aa13.93□□□□□ -0.18
BRCC3-201ENST00000330045 PLSCR5A0PG75 271 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 TMEM212A6NML5 194 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 C17orf105B2RV13 164 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 B8ZZF3 427 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 H3BSH0 61 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 XRCC3O43542 346 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 RENP00797 406 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 HRGP04196 525 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 HIST1H2ABP04908 130 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 RPS27P42677 84 aaKnown RBP13.92□□□□□ -0.18
BRCC3-201ENST00000330045 SCAND1P57086 179 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 EGR3Q06889 387 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 ODF4Q2M2E3 257 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 HIST3H2AQ7L7L0 130 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 OR51A4Q8NGJ6 313 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 ZNF563Q8TA94 476 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms