RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 RPS7P62081 194 aaKnown RBP13.56□□□□□ -0.24
PRPF3-201ENST00000324862 ZNF91Q05481 1191 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 GPR139Q6DWJ6 353 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 NIPAL3Q6P499 406 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 AHSA2Q719I0 299 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 KISS1RQ969F8 398 aaPredicted RBP13.56□□□□□ -0.24
PRPF3-201ENST00000324862 ZMYND19Q96E35 227 aaPredicted RBP13.56□□□□□ -0.24
PRPF3-201ENST00000324862 CALHM2Q9HA72 323 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 TAS2R16Q9NYV7 291 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 SH3BGRL2Q9UJC5 107 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 LOC102725191A0A1B0GVB3 256 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 SLC22A23A1A5C7 686 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 IDH3BO43837 385 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 VAMP5O95183 116 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 MRPL3P09001 348 aaKnown RBP13.56□□□□□ -0.24
PRPF3-201ENST00000324862 SPI1P17947 270 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 C21orf33P30042 268 aaPredicted RBP13.56□□□□□ -0.24
PRPF3-201ENST00000324862 OCLNQ16625 522 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 TMEM201Q5SNT2 666 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 NXNL2Q5VZ03 156 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 ADGRE4PQ86SQ3 457 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 ZNF540Q8NDQ6 660 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 GGHQ92820 318 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 KCNK17Q96T54 332 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 NMNAT2Q9BZQ4 307 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 KLHL21Q9UJP4 597 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 MYRFQ9Y2G1 1151 aa13.56□□□□□ -0.24
PRPF3-201ENST00000324862 CCDC182A6NF36 153 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 MPZL2O60487 215 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 SLC16A7O60669 478 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 HTR1AP08908 422 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 PGA4P0DJD7 388 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 PGA3P0DJD8 388 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 DBTP11182 482 aaKnown RBP13.55□□□□□ -0.24
PRPF3-201ENST00000324862 SLC2A5P22732 501 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 EEF1B2P24534 225 aaKnown RBP13.55□□□□□ -0.24
PRPF3-201ENST00000324862 POU4F3Q15319 338 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 RTL6Q6ICC9 239 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 GFRALQ6UXV0 394 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 NCCRP1Q6ZVX7 275 aaPredicted RBP13.55□□□□□ -0.24
PRPF3-201ENST00000324862 C9orf106Q8NAJ2 232 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 OR6K6Q8NGW6 343 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 NSMAFQ92636 917 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 ZNF837Q96EG3 531 aaPredicted RBP13.55□□□□□ -0.24
PRPF3-201ENST00000324862 OR2M2Q96R28 347 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 MRPL13Q9BYD1 178 aaKnown RBP13.55□□□□□ -0.24
PRPF3-201ENST00000324862 NDEL1Q9GZM8 345 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 CLCF1Q9UBD9 225 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 TINAGQ9UJW2 476 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 GTF3C1Q12789 2109 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 PRODHO43272 600 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 ZNF432O94892 652 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 RPS27P42677 84 aaKnown RBP13.55□□□□□ -0.24
PRPF3-201ENST00000324862 ACSF3Q4G176 576 aaPredicted RBP13.55□□□□□ -0.24
PRPF3-201ENST00000324862 KRTCAP3Q53RY4 240 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 SEM1Q6ZVN7 128 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.55□□□□□ -0.24
PRPF3-201ENST00000324862 ZNF511Q8NB15 262 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 OR4F15Q8NGB8 312 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 SLC25A44Q96H78 314 aaPredicted RBP13.55□□□□□ -0.24
PRPF3-201ENST00000324862 NR1H4Q96RI1 486 aaPredicted RBP13.55□□□□□ -0.24
PRPF3-201ENST00000324862 TEAD3Q99594 435 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 SF3B5Q9BWJ5 86 aaKnown RBP13.55□□□□□ -0.24
PRPF3-201ENST00000324862 ERVK-18Q9QC07 812 aa13.55□□□□□ -0.24
PRPF3-201ENST00000324862 OR14I1A6ND48 311 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 TVP23AA6NH52 213 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 M0R3G1 203 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 MPZL1O95297 269 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 ABOP16442 354 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 GSTT1P30711 240 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 HCCSP53701 268 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 SLC25A30Q5SVS4 291 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 LINC01590Q5TEZ4 76 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 NUFIP2Q7Z417 695 aaKnown RBP13.54□□□□□ -0.24
PRPF3-201ENST00000324862 OR6X1Q8NH79 312 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 ZNF566Q969W8 418 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 PAQR5Q9NXK6 330 aaPredicted RBP13.54□□□□□ -0.24
PRPF3-201ENST00000324862 FAM215AQ9Y5M1 114 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 ZNF726A6NNF4 738 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 UPK3AO75631 287 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 STSP08842 583 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 ATP6V1B1P15313 513 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 PAICSP22234 425 aaKnown RBP13.54□□□□□ -0.24
PRPF3-201ENST00000324862 FOXF2Q12947 444 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 GTF2IRD2BQ6EKJ0 949 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 MEPCEQ7L2J0 689 aaKnown RBP13.54□□□□□ -0.24
PRPF3-201ENST00000324862 P4HA3Q7Z4N8 544 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 GTF2IRD2Q86UP8 949 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 TMEM123Q8N131 208 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 PROKR2Q8NFJ6 384 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 OR51G2Q8NGK0 314 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 RNFT2Q96EX2 444 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 ALKBH3Q96Q83 286 aaPredicted RBP13.54□□□□□ -0.24
PRPF3-201ENST00000324862 C12orf49Q9H741 205 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 RNF122Q9H9V4 155 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 VSX1Q9NZR4 365 aaPredicted RBP13.54□□□□□ -0.24
PRPF3-201ENST00000324862 H2AFY2Q9P0M6 372 aaPredicted RBP13.54□□□□□ -0.24
PRPF3-201ENST00000324862 KLHL9Q9P2J3 617 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 PSORS1C1Q9UIG5 152 aa13.54□□□□□ -0.24
PRPF3-201ENST00000324862 NPIPB13A6NJU9 1138 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms