RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 ANKRD16Q6P6B7 361 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 SMARCD3Q6STE5 483 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 KLHL17Q6TDP4 642 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 LINGO2Q7L985 606 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 ZER1Q7Z7L7 766 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 OR52L1Q8NGH7 329 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 OR4C15Q8NGM1 316 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 FNDC8Q8TC99 324 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 NANOS1Q8WY41 292 aaKnown RBP9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 TMEM54Q969K7 222 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 MUS81Q96NY9 551 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 KATNB1Q9BVA0 655 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 ESRP2Q9H6T0 727 aaKnown RBP9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 OBP2BQ9NPH6 170 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 RASSF1Q9NS23 344 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 GRHPRQ9UBQ7 328 aa9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 ZNF346Q9UL40 294 aaKnown RBP9.66□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 A0A096LPE4 126 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 A0A1W2PPZ6 126 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 A0A1W2PR80 420 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 HRGP04196 525 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 CD14P08571 375 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 FCGR1AP12314 374 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 PAX7P23759 505 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 CAPZA2P47755 286 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 HMGA2P52926 109 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 ERVK-25P63136 954 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 TSPAN31Q12999 210 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 TBRG1Q3YBR2 411 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 HIKESHIQ53FT3 197 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 PHYHD1Q5SRE7 291 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 C1orf94Q6P1W5 598 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 ZNF813Q6ZN06 617 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 LRRC75AQ8NAA5 344 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 SYT14Q8NB59 555 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 AQP11Q8NBQ7 271 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 OR10G2Q8NGC3 310 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 GIPC3Q8TF64 312 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 PLPPR2Q96GM1 343 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 TSPAN32Q96QS1 320 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 GPX7Q96SL4 187 aaPredicted RBP9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 FOXB1Q99853 325 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 ALG12Q9BV10 488 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 OR52D1Q9H346 318 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 MOV10Q9HCE1 1003 aaKnown RBP9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 CCM2LQ9NUG4 571 aaPredicted RBP9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 VNN3Q9NY84 501 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 MGAT4BQ9UQ53 548 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 PRR14LQ5THK1 2151 aa9.65□□□□□ -0.86
CSPG4P2Y-201ENST00000306853 NBPF19A0A087WUL8 3843 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ARRDC5A6NEK1 342 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DEFB108AA8MXU0 73 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 M0R1B8 84 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ARHGEF9O43307 516 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DHHO43323 396 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 KLF4O43474 513 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TIPRLO75663 272 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SEC14L2O76054 403 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 FARS2O95363 451 aaKnown RBP9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CD3EP07766 207 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 QDPRP09417 244 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 HOXB1P14653 301 aaPredicted RBP9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 GSTM3P21266 225 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 NOS3P29474 1203 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SDHAP31040 664 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 GSSP48637 474 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZNF83P51522 516 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ARF1P84077 181 aaKnown RBP9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 MYBPC1Q00872 1141 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 KRR1Q13601 381 aaKnown RBP9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ARMC4Q5T2S8 1044 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 GPR139Q6DWJ6 353 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TMEM108Q6UXF1 575 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 NHLRC1Q6VVB1 395 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DPY19L2P2Q6ZN68 376 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZNF620Q6ZNG0 422 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 C22orf34Q6ZV56 151 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 JAZF1Q86VZ6 243 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CCDC36Q8IYA8 594 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ARIH2OSQ8N7S6 290 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PAPD5Q8NDF8 572 aaKnown RBP9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZNF519Q8TB69 540 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 MAGEE2Q8TD90 523 aaPredicted RBP9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 HDAC2Q92769 488 aaKnown RBP9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 GTPBP3Q969Y2 492 aaKnown RBP9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 RBP7Q96R05 134 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 KCNK17Q96T54 332 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 KCNS3Q9BQ31 491 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 IFT27Q9BW83 186 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZNF556Q9HAH1 456 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TBC1D23Q9NUY8 699 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PDP1Q9P0J1 537 aaPredicted RBP9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 KIF17Q9P2E2 1029 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DNAJB9Q9UBS3 223 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 IL20RAQ9UHF4 553 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 EDARQ9UNE0 448 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ADAM18Q9Y3Q7 739 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 AP4S1Q9Y587 144 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLC25A15Q9Y619 301 aa9.64□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 HECTD1Q9ULT8 2610 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms