RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 KRT8P05787 483 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 HLA-DOBP13765 273 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 BLVRAP53004 296 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 FOXK1P85037 733 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 HSF1Q00613 529 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 CCDC92Q53HC0 331 aaPredicted RBP13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 EEF1A1P5Q5VTE0 462 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 GLRX5Q86SX6 157 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 UEVLDQ8IX04 471 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 BEST3Q8N1M1 668 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 YIPF7Q8N8F6 280 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 FOXN4Q96NZ1 517 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 COPS3Q9UNS2 423 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 MED12Q93074 2177 aa13.05□□□□□ -0.32
SHCBP1-201ENST00000303383 TRBV2A0A0J9YWF9 115 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 BMP4P12644 408 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 LIFP15018 202 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 FGF9P31371 208 aaPredicted RBP13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 AP3S1Q92572 193 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 PRRX2Q99811 253 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 RIF1Q5UIP0 2472 aaKnown RBP13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 ETV2O00321 342 aaPredicted RBP13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 RPP14O95059 124 aaKnown RBP13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 MYL9P24844 172 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 LIMK1P53667 647 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 DLX5P56178 289 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 SIRPAP78324 504 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 DPY19L4Q7Z388 723 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 MS4A15Q8N5U1 240 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 IP6K3Q96PC2 410 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 AKIP1Q9NQ31 210 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 B9D1Q9UPM9 204 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 HDGFL3Q9Y3E1 203 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 MS4A18H0YCH9 400 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 EFNA2O43921 213 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 PSMB10P40306 273 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 ZP4Q12836 540 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 TCF15Q12870 199 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 MS4A18Q3C1V0 323 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 CDONQ4KMG0 1287 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 CLEC1AQ8NC01 280 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 ZNF519Q8TB69 540 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 FRMD6Q96NE9 622 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 SMAD5Q99717 465 aaKnown RBP13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 WDR76Q9H967 626 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 SMURF1Q9HCE7 757 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 PALMDQ9NP74 551 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 ACOXLQ9NUZ1 547 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 MED29Q9NX70 200 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 ZMIZ1Q9ULJ6 1067 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 POLHQ9Y253 713 aa13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 SIRT4Q9Y6E7 314 aaPredicted RBP13.04□□□□□ -0.32
SHCBP1-201ENST00000303383 TRAPPC6AO75865 159 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 SERPINA3P01011 423 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 CLEC2LP0C7M8 214 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 ENPP1P22413 925 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 GPR85P60893 370 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 GLO1Q04760 184 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 FAM205BPQ63HN1 556 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 VASNQ6EMK4 673 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 JMJD6Q6NYC1 403 aaPredicted RBP13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 PXKQ7Z7A4 578 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 GTPBP8Q8N3Z3 284 aaPredicted RBP13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 OR14L1PQ8NHC6 308 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 GHSRQ92847 366 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 PELI1Q96FA3 418 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 IL17BQ9UHF5 180 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 SLC22A23A1A5C7 686 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 PLPP2O43688 288 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 SPARCP09486 303 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 GDI2P50395 445 aaKnown RBP13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 BIDP55957 195 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 SLC35A1P78382 337 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 INSL4Q14641 139 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 RPL22L1Q6P5R6 122 aaKnown RBP13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 CD200R1LQ6Q8B3 271 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 CEACAM19Q7Z692 300 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 SLC25A46Q96AG3 418 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 FER1L6-AS2Q96M78 137 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 RBP7Q96R05 134 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 SNX18Q96RF0 628 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 MNTQ99583 582 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 PIGQQ9BRB3 760 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 LRFN1Q9P244 771 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 GPANK1O95872 356 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 IGHMP01871 453 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 ZNF823P16415 610 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 ZNF43P17038 809 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 CD53P19397 219 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 ADAM8P78325 824 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 DCAF10Q5QP82 559 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 EXD3Q8N9H8 876 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 TMEM41AQ96HV5 264 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 TIMP4Q99727 224 aa13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 TSPAN10Q9H1Z9 355 aaPredicted RBP13.03□□□□□ -0.32
SHCBP1-201ENST00000303383 SLC35F4A4IF30 521 aa13.02□□□□□ -0.32
SHCBP1-201ENST00000303383 PHYHO14832 338 aa13.02□□□□□ -0.32
SHCBP1-201ENST00000303383 OR8G3PP0DMU2 310 aa13.02□□□□□ -0.32
SHCBP1-201ENST00000303383 RPS27P42677 84 aaKnown RBP13.02□□□□□ -0.32
SHCBP1-201ENST00000303383 KCTD20Q7Z5Y7 419 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms