RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 SNRPD2P62316 118 aaKnown RBP8.25□□□□□ -1.09
HMHB1-201ENST00000289448 ZNF74Q16587 644 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 VMACQ2NL98 169 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 DNAL1Q4LDG9 190 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 CCDC80Q76M96 950 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 ZNF627Q7L945 461 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 PXKQ7Z7A4 578 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 PATL1Q86TB9 770 aaKnown RBP8.25□□□□□ -1.09
HMHB1-201ENST00000289448 CALHM3Q86XJ0 350 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 ARHGAP24Q8N264 748 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 SVOPLQ8N434 492 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 OR4F15Q8NGB8 312 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 OR5J2Q8NH18 312 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 FGFBP3Q8TAT2 258 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 ADAMTS16Q8TE57 1224 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 PROX1Q92786 737 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 FOXN4Q96NZ1 517 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 DOK1Q99704 481 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 VRK1Q99986 396 aaPredicted RBP8.25□□□□□ -1.09
HMHB1-201ENST00000289448 PRSS27Q9BQR3 290 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 ZNF426Q9BUY5 554 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 PCDHAC1Q9H158 963 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 C1orf21Q9H246 121 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 EVA1AQ9H8M9 152 aa8.25□□□□□ -1.09
HMHB1-201ENST00000289448 IGHV4-61A0A0C4DH41 118 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 TRAPPC13A5PLN9 417 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 hCG_2039718K7EN88 272 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 KPNA4O00629 521 aaPredicted RBP8.24□□□□□ -1.09
HMHB1-201ENST00000289448 MT-ATP6P00846 226 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 CSF3P09919 207 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 PATE4P0C8F1 98 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 CD79AP11912 226 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 COX4I1P13073 169 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 ZNF35P13682 527 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 ZNF14P17017 642 aaPredicted RBP8.24□□□□□ -1.09
HMHB1-201ENST00000289448 NR4A1P22736 598 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 NR4A2P43354 598 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 CAPZA2P47755 286 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 PDLIM4P50479 330 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 BIDP55957 195 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 PIGFQ07326 219 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 ZP4Q12836 540 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 MAPRE2Q15555 327 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 CARTPTQ16568 116 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 TRMT5Q32P41 509 aaKnown RBP8.24□□□□□ -1.09
HMHB1-201ENST00000289448 KRT80Q6KB66 452 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 LRFN4Q6PJG9 635 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 ZNF813Q6ZN06 617 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 SLC35D2Q76EJ3 337 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 CXXC5Q7LFL8 322 aaKnown RBP8.24□□□□□ -1.09
HMHB1-201ENST00000289448 SLC46A3Q7Z3Q1 461 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 CCDC36Q8IYA8 594 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 CDK20Q8IZL9 346 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 ARIH2OSQ8N7S6 290 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 RBM15BQ8NDT2 890 aaKnown RBP8.24□□□□□ -1.09
HMHB1-201ENST00000289448 OR6N1Q8NGY5 312 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 RP9Q8TA86 221 aaKnown RBP8.24□□□□□ -1.09
HMHB1-201ENST00000289448 TMEM54Q969K7 222 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 LRRC58Q96CX6 371 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 ZNF583Q96ND8 569 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 ULBP2Q9BZM5 246 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 MMADHCQ9H3L0 296 aaPredicted RBP8.24□□□□□ -1.09
HMHB1-201ENST00000289448 ZNF442Q9H7R0 627 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 MOV10Q9HCE1 1003 aaKnown RBP8.24□□□□□ -1.09
HMHB1-201ENST00000289448 MEPEQ9NQ76 525 aaPredicted RBP8.24□□□□□ -1.09
HMHB1-201ENST00000289448 TAS2R1Q9NYW7 299 aa8.24□□□□□ -1.09
HMHB1-201ENST00000289448 SH3PXD2BA1X283 911 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 ZNF726A6NNF4 738 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 GSC2O15499 205 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 ASAH2BP0C7U1 165 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 ZNF16P17020 682 aaPredicted RBP8.23□□□□□ -1.09
HMHB1-201ENST00000289448 NPR2P20594 1047 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 FUT4P22083 530 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 GIPRP48546 466 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 CSNK1A1P48729 337 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 PPOXP50336 477 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 ELF3P78545 371 aaPredicted RBP8.23□□□□□ -1.09
HMHB1-201ENST00000289448 LSM11P83369 360 aaKnown RBP eCLIP8.23□□□□□ -1.09
HMHB1-201ENST00000289448 MXRA7P84157 204 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 RUNX1T1Q06455 604 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 SNTB2Q13425 540 aaKnown RBP8.23□□□□□ -1.09
HMHB1-201ENST00000289448 CYLC2Q14093 348 aaPredicted RBP8.23□□□□□ -1.09
HMHB1-201ENST00000289448 DAG1Q14118 895 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 GGTLC2Q14390 218 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 MELKQ14680 651 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 GSG1Q2KHT4 349 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 CYB5R2Q6BCY4 276 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 REP15Q6BDI9 236 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 TTC33Q6PID6 262 aaPredicted RBP8.23□□□□□ -1.09
HMHB1-201ENST00000289448 RINLQ6ZS11 566 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 CARM1Q86X55 608 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 SNX32Q86XE0 403 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 NKAIN4Q8IVV8 208 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 SLC30A8Q8IWU4 369 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 SKA3Q8IX90 412 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 C10orf67Q8IYJ2 551 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 POU5F2Q8N7G0 328 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 OR8J3Q8NGG0 315 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 OR6X1Q8NH79 312 aa8.23□□□□□ -1.09
HMHB1-201ENST00000289448 UTP4Q969X6 686 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms