RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ZC3H12DA2A288 527 aaKnown RBP12.84□□□□□ -0.35
CDH3-201ENST00000264012 PRKNO60260 465 aaPredicted RBP12.84□□□□□ -0.35
CDH3-201ENST00000264012 SLC2A10O95528 541 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 EPHA1P21709 976 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 S100A2P29034 98 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 SLC14A1Q13336 389 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 RHEBQ15382 184 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 ELP2Q6IA86 826 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 SYT13Q7L8C5 426 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 DCXRQ7Z4W1 244 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 OR56B1Q8NGI3 324 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 GLYATL2Q8WU03 294 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 IL1F10Q8WWZ1 152 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 TCEAL3Q969E4 200 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 CMSS1Q9BQ75 279 aaKnown RBP12.84□□□□□ -0.35
CDH3-201ENST00000264012 CDCA4Q9BXL8 241 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 TWSG1Q9GZX9 223 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 CALHM2Q9HA72 323 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 SH3BGRL2Q9UJC5 107 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 YBX2Q9Y2T7 364 aaKnown RBP12.84□□□□□ -0.35
CDH3-201ENST00000264012 LMO7DNF2Z398 122 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 TNFRSF10AO00220 468 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 GPR171O14626 319 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 UBCP0CG48 685 aaKnown RBP12.83□□□□□ -0.36
CDH3-201ENST00000264012 CHRNB1P11230 501 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 PSMB1P20618 241 aaKnown RBP12.83□□□□□ -0.36
CDH3-201ENST00000264012 PRKACBP22694 351 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 PTPN6P29350 595 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 CAMLGP49069 296 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 MRPL19P49406 292 aaKnown RBP12.83□□□□□ -0.36
CDH3-201ENST00000264012 TNK1Q13470 666 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 FAHD1Q6P587 224 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 VASH1Q7L8A9 365 aaPredicted RBP12.83□□□□□ -0.36
CDH3-201ENST00000264012 TMEM99Q8N816 258 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 GOT1L1Q8NHS2 421 aaPredicted RBP12.83□□□□□ -0.36
CDH3-201ENST00000264012 SIAEQ9HAT2 523 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 OBP2BQ9NPH6 170 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 PCDHGA1Q9Y5H4 931 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 ASPDHA6ND91 283 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 HLA-AP01891 365 aaKnown RBP12.83□□□□□ -0.36
CDH3-201ENST00000264012 GALEQ14376 348 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 ABHD5Q8WTS1 349 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 C8orf44Q96CB5 159 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 DSCR3O14972 297 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 HIST1H1CP16403 213 aaKnown RBP12.83□□□□□ -0.36
CDH3-201ENST00000264012 ABOP16442 354 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 CX3CR1P49238 355 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 TEKQ02763 1124 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 GPR176Q14439 515 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 PAQR6Q6TCH4 344 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 ZNF813Q6ZN06 617 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 KCNG3Q8TAE7 436 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 LRRC61Q9BV99 259 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 RGCCQ9H4X1 137 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 WSB2Q9NYS7 404 aaPredicted RBP12.83□□□□□ -0.36
CDH3-201ENST00000264012 PTTG3PQ9NZH4 202 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 MUTYHQ9UIF7 546 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 OR52A1Q9UKL2 312 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 MRPS28Q9Y2Q9 187 aaKnown RBP12.83□□□□□ -0.36
CDH3-201ENST00000264012 YBX1P67809 324 aaKnown RBP12.83□□□□□ -0.36
CDH3-201ENST00000264012 IHHQ14623 411 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 SLC36A2Q495M3 483 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 ZNF684Q5T5D7 378 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 LIPNQ5VXI9 398 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 FCRL6Q6DN72 434 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 NPSR1Q6W5P4 371 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 NT5CQ8TCD5 201 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 HSD17B8Q92506 261 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 MICU1Q9BPX6 476 aa12.83□□□□□ -0.36
CDH3-201ENST00000264012 CEP290O15078 2479 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 A0A1B0GV50 99 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 PEX14O75381 377 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 IL32P24001 234 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 EPHA2P29317 976 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 KIAA0040Q15053 153 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 CALHM3Q86XJ0 350 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 OR51D1Q8NGF3 324 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 OR5M1Q8NGP8 315 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 GIMAP1Q8WWP7 306 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 RAB3CQ96E17 227 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 EMC6Q9BV81 110 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 LAT2Q9GZY6 243 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 CRISPLD2Q9H0B8 497 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 TCEAL2Q9H3H9 227 aaPredicted RBP12.82□□□□□ -0.36
CDH3-201ENST00000264012 ACKR4Q9NPB9 350 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 SRMP19623 302 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 OXA1LQ15070 435 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 RBMS2Q15434 407 aaKnown RBP12.82□□□□□ -0.36
CDH3-201ENST00000264012 SOWAHCQ53LP3 525 aaPredicted RBP12.82□□□□□ -0.36
CDH3-201ENST00000264012 UBALD2Q8IYN6 164 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 MORN4Q8NDC4 146 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 FGGYQ96C11 551 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 PSD2Q9BQI7 771 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 ICOSLGO75144 302 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 ACTL6BO94805 426 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 PAPLNO95428 1278 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 FAM109BQ6ICB4 259 aaPredicted RBP12.82□□□□□ -0.36
CDH3-201ENST00000264012 COMMD7Q86VX2 200 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 SLC22A24Q8N4F4 322 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 OR1S1Q8NH92 325 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms