RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ADAMTS18Q8TE60 1221 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 ISL2Q96A47 359 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 PDLIM5Q96HC4 596 aaKnown RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 IKZF5Q9H5V7 419 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 TRDV1A0A1B0GX56 115 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 OR2T1O43869 369 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 IGFBP6P24592 240 aaPredicted RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 GCH1P30793 250 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 NPBWR1P48145 328 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 RPS15P62841 145 aaKnown RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 EXOSC2Q13868 293 aaKnown RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 TAZQ16635 292 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 MPEG1Q2M385 716 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 SAXO2Q658L1 398 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 BRICD5Q6PL45 260 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 NPSR1Q6W5P4 371 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 SLC16A11Q8NCK7 471 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 TMED6Q8WW62 240 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 NRSN2Q9GZP1 204 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 ADAM19Q9H013 955 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 AUNIPQ9H7T9 357 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 WDR76Q9H967 626 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 SMCO4Q9NRQ5 59 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 TAS2R5Q9NYW4 299 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 NUMBLQ9Y6R0 609 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 GJE1A6NN92 205 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 EFSO43281 561 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 ADAMTS4O75173 837 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 ABOP16442 354 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 RPP30P78346 268 aaKnown RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 SLC35A2P78381 396 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 PRDX1Q06830 199 aaKnown RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 MKXQ8IYA7 352 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 ZNF296Q8WUU4 475 aaPredicted RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 SPACA5Q96QH8 159 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 NKX3-1Q99801 234 aaPredicted RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 ATF6BQ99941 703 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 NKX2-4Q9H2Z4 354 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 USP3Q9Y6I4 520 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 ARID1BQ8NFD5 2236 aaPredicted RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 CTNSO60931 367 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 PKLRP30613 574 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 TAS2R30P59541 319 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 UBE2IP63279 158 aaKnown RBP11.12□□□□□ -0.63
SMG6-201ENST00000263073 LIPHQ8WWY8 451 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 ASB17Q8WXJ9 295 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 ERVMER34-1Q9H9K5 563 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 SLC25A37Q9NYZ2 338 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 MED25Q71SY5 747 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 FAM122BQ7Z309 247 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 MDGA2Q7Z553 956 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 MARCH3Q86UD3 253 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 FAM174AQ8TBP5 190 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 KCTD12Q96CX2 325 aaKnown RBP11.12□□□□□ -0.63
SMG6-201ENST00000263073 ENKD1Q9H0I2 346 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 UBQLN3Q9H347 655 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 CSNK1G1Q9HCP0 422 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 HRASLSQ9HDD0 168 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 RNF186Q9NXI6 227 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 GPR55Q9Y2T6 319 aaPredicted RBP11.12□□□□□ -0.63
SMG6-201ENST00000263073 H0YIV9 168 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 PPP1R2P9O14990 202 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 HNRNPA1P09651 372 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMG6-201ENST00000263073 TLE4Q04727 773 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 KIR2DS3Q14952 304 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 HNRNPA1L2Q32P51 320 aaKnown RBP11.12□□□□□ -0.63
SMG6-201ENST00000263073 GLIPR1L1Q6UWM5 242 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 DCXRQ7Z4W1 244 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 TVP23CQ96ET8 276 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 CLSTN3Q9BQT9 956 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 KIF25Q9UIL4 384 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 FOXE1O00358 373 aaPredicted RBP11.12□□□□□ -0.63
SMG6-201ENST00000263073 CARD18P57730 90 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 CD300CQ08708 224 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 GLYR1Q49A26 553 aaPredicted RBP11.12□□□□□ -0.63
SMG6-201ENST00000263073 CD276Q5ZPR3 534 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 TMEM123Q8N131 208 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 OR56B1Q8NGI3 324 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 CHTF18Q8WVB6 975 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 TOE1Q96GM8 510 aaKnown RBP11.12□□□□□ -0.63
SMG6-201ENST00000263073 MAP3K3Q99759 626 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 SPACA1Q9HBV2 294 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 CUTCQ9NTM9 273 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 ACSS1Q9NUB1 689 aaPredicted RBP11.12□□□□□ -0.63
SMG6-201ENST00000263073 ANKRD10Q9NXR5 420 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 H3BUI4 141 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 OR2C1O95371 312 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 CSF3P09919 207 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 ARRB2P32121 409 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 CD80P33681 288 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 ZNF93P35789 620 aaPredicted RBP11.12□□□□□ -0.63
SMG6-201ENST00000263073 BAMBIQ13145 260 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 WFDC5Q8TCV5 224 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 NANOS1Q8WY41 292 aaKnown RBP11.12□□□□□ -0.63
SMG6-201ENST00000263073 MAP6Q96JE9 813 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 Q96M85 177 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 NIPSNAP3BQ9BS92 247 aa11.12□□□□□ -0.63
SMG6-201ENST00000263073 ISG20L2Q9H9L3 353 aaKnown RBP11.12□□□□□ -0.63
SMG6-201ENST00000263073 PISDQ9UG56 409 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms