RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 F12P00748 615 aaPredicted RBP13.65□□□□□ -0.22
XRCC1-201ENST00000262887 SPI1P17947 270 aa13.65□□□□□ -0.22
XRCC1-201ENST00000262887 HTRA4P83105 476 aaPredicted RBP13.65□□□□□ -0.22
XRCC1-201ENST00000262887 PDZK1IP1Q13113 114 aa13.65□□□□□ -0.22
XRCC1-201ENST00000262887 ATXN7L3Q14CW9 347 aaPredicted RBP13.65□□□□□ -0.22
XRCC1-201ENST00000262887 LIN54Q6MZP7 749 aa13.65□□□□□ -0.22
XRCC1-201ENST00000262887 C3orf33Q6P1S2 294 aa13.65□□□□□ -0.22
XRCC1-201ENST00000262887 ENPP7Q6UWV6 458 aa13.65□□□□□ -0.22
XRCC1-201ENST00000262887 SLC43A2Q8N370 569 aa13.65□□□□□ -0.22
XRCC1-201ENST00000262887 OR4K14Q8NGD5 310 aa13.65□□□□□ -0.22
XRCC1-201ENST00000262887 OR5AK2Q8NH90 309 aa13.65□□□□□ -0.22
XRCC1-201ENST00000262887 ELP5Q8TE02 316 aa13.65□□□□□ -0.22
XRCC1-201ENST00000262887 SFXN1Q9H9B4 322 aa13.65□□□□□ -0.22
XRCC1-201ENST00000262887 FLRT3Q9NZU0 649 aa13.65□□□□□ -0.22
XRCC1-201ENST00000262887 TRAV18A0A075B6X5 111 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 A0A1B0GTI1 187 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 PRR32B1ATL7 298 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 F5H0A9 414 aaPredicted RBP13.64□□□□□ -0.23
XRCC1-201ENST00000262887 SCAMP1O15126 338 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 CTAG2O75638 210 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 NPBWR1P48145 328 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 GPR143P51810 404 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 CDK3Q00526 305 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 ALG10BQ5I7T1 473 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 FAM220AQ7Z4H9 259 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 OR2L3Q8NG85 312 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 CD99L2Q8TCZ2 262 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 Q96M85 177 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 STEAP1Q9UHE8 339 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 MEX3AA1L020 520 aaKnown RBP13.64□□□□□ -0.23
XRCC1-201ENST00000262887 OR6C76A6NM76 312 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 OR2AT4A6NND4 320 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 ACTL6AO96019 429 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 OR8G3PP0DMU2 310 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 PRSS3P35030 304 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 SCAND1P57086 179 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 PLAURQ03405 335 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 SREBF2Q12772 1141 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 NKAIN2Q5VXU1 208 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 RBMS3Q6XE24 437 aaKnown RBP13.64□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF813Q6ZN06 617 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 CLEC1AQ8NC01 280 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 OR2L8Q8NGY9 312 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 PHOSPHO2Q8TCD6 241 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 ZPLD1Q8TCW7 415 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 ING5Q8WYH8 240 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 CNTNAP3BQ96NU0 1288 aa13.64□□□□□ -0.23
XRCC1-201ENST00000262887 FAM171A2A8MVW0 826 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 FADS1O60427 444 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 MELTFP08582 738 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 PTGFRP43088 359 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 EFNB2P52799 333 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 SRSF4Q08170 494 aaKnown RBP13.63□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF425Q6IV72 752 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 LPCAT3Q6P1A2 487 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 ADAMTSL4Q6UY14 1074 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 USP53Q70EK8 1073 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 SKA3Q8IX90 412 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 GTPBP8Q8N3Z3 284 aaPredicted RBP13.63□□□□□ -0.23
XRCC1-201ENST00000262887 NPEPL1Q8NDH3 523 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 OR51D1Q8NGF3 324 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 OR8D1Q8WZ84 308 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 RNF166Q96A37 237 aaPredicted RBP13.63□□□□□ -0.23
XRCC1-201ENST00000262887 TRAV8-7A0A075B6U6 113 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 TMEM200CA6NKL6 621 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 FGF16O43320 207 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 CD34P28906 385 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 CASRP41180 1078 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 CAPZA1P52907 286 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 SRSF3P84103 164 aaKnown RBP13.63□□□□□ -0.23
XRCC1-201ENST00000262887 ID2Q02363 134 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 VWA2Q5GFL6 755 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 SLC35D3Q5M8T2 416 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 LIPNQ5VXI9 398 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 SLC6A19Q695T7 634 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 GABRG1Q8N1C3 465 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 ARL11Q969Q4 196 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 FBXL21Q9UKT6 434 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 ENTPD2Q9Y5L3 495 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 H3BSH0 61 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 TO15178 435 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 HEXAP06865 529 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 TACSTD2P09758 323 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF888P0CJ79 500 aaPredicted RBP13.63□□□□□ -0.23
XRCC1-201ENST00000262887 PRF1P14222 555 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 CSRP1P21291 193 aaKnown RBP13.63□□□□□ -0.23
XRCC1-201ENST00000262887 SNRPEP62304 92 aaKnown RBP13.63□□□□□ -0.23
XRCC1-201ENST00000262887 ALKBH1Q13686 389 aaKnown RBP13.63□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF234Q14588 700 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 STX12Q86Y82 276 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF565Q8N9K5 539 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 MFSD9Q8NBP5 474 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 OR52E1Q8NGJ3 308 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 OR1J2Q8NGS2 313 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 PAQR8Q8TEZ7 354 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 SEC22AQ96IW7 307 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 CAPNS2Q96L46 248 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 MNTQ99583 582 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 SLC25A21Q9BQT8 299 aaPredicted RBP13.63□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF426Q9BUY5 554 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms