RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 FAM71E1Q6IPT2 247 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 GALNT16Q8N428 558 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 SLC15A4Q8N697 577 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 TP53I13Q8NBR0 393 aaPredicted RBP12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 CT55Q8WUE5 264 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 LINC00615Q96LM1 132 aaPredicted RBP12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 WWTR1Q9GZV5 400 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 SHARPINQ9H0F6 387 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 OR2S2Q9NQN1 319 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 EHFQ9NZC4 300 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 MYH7P12883 1935 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 A8MXE2 369 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 C17orf112F2Z3M2 114 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 TAPBPO15533 448 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 PLA2G7Q13093 441 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 ANKRD16Q6P6B7 361 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 TMEM92Q6UXU6 159 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 CARFQ8N187 725 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 ZNF321PQ8N8H1 164 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 ACBD4Q8NC06 268 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 TMIGD2Q96BF3 282 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 SPACA9Q96E40 222 aaPredicted RBP12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 CDHR4A6H8M9 788 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 TBXA2RP21731 343 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 WDR88Q6ZMY6 472 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 TRILQ7L0X0 811 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 TTC9Q92623 222 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 ZNF707Q96C28 371 aaPredicted RBP12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 DAZAP1Q96EP5 407 aaKnown RBP12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 TMEM59Q9BXS4 323 aa12.46□□□□□ -0.42
PDGFRB-201ENST00000261799 HOXC4P09017 264 aaPredicted RBP12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 ACP2P11117 423 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 PRKACAP17612 351 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 SUB1P53999 127 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 SUMO3P55854 103 aaPredicted RBP12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 RNPS1Q15287 305 aaKnown RBP12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 GDF7Q7Z4P5 450 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 FBXW5Q969U6 566 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 GABRG3Q99928 467 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 LIN7BQ9HAP6 207 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 PDFQ9HBH1 243 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 ANKRD61A6NGH8 418 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 K7EQS6 105 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 P2RY10O00398 339 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 PLPP1O14494 284 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 QDPRP09417 244 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 TNFRSF1AP19438 455 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 CD79BP40259 229 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 CLN3Q13286 438 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 SLC35D3Q5M8T2 416 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 THEM4Q5T1C6 240 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 SLC35G3Q8N808 338 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 ZBTB8BQ8NAP8 495 aaPredicted RBP12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 BHLHE23Q8NDY6 225 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 ZNF420Q8TAQ5 688 aaPredicted RBP12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 RND1Q92730 232 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 KHSRPQ92945 711 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 BIRC8Q96P09 236 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 RNF32Q9H0A6 362 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 A0A1W2PPV4 95 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 LGI1O95970 557 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 B3GALT4O96024 378 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 CDONQ4KMG0 1287 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 CD300LGQ6UXG3 332 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 EGLN2Q96KS0 407 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 RAB1BQ9H0U4 201 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 UFSP2Q9NUQ7 469 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 FBXO7Q9Y3I1 522 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 NAP1L6A6NFF2 107 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 TOX3O15405 576 aaPredicted RBP12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 GABRA1P14867 456 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 PTPN6P29350 595 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 PRTGQ2VWP7 1150 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 GLYR1Q49A26 553 aaPredicted RBP12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 LILRA6Q6PI73 481 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 SPARTQ8N0X7 666 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 OR51A2Q8NGJ7 313 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 NOX3Q9HBY0 568 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 ONECUT1Q9UBC0 465 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 STRCQ7RTU9 1775 aa12.45□□□□□ -0.42
PDGFRB-201ENST00000261799 A0A096LPE4 126 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 A0A1W2PPZ6 126 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 FANCGO15287 622 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 FGF17O60258 216 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 FAM157BP0CG42 384 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 ZNF133P52736 654 aaPredicted RBP12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 AKR1C1Q04828 323 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 ZNF181Q2M3W8 571 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 CCDC58Q4VC31 144 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 OR6T1Q8NGN1 323 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 OR52N5Q8NH56 324 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 CORO2AQ92828 525 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 ATF6BQ99941 703 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 UBTD1Q9HAC8 227 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 J3KTA2 159 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 AKR1D1P51857 326 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 PROX2Q3B8N5 592 aa12.44□□□□□ -0.42
PDGFRB-201ENST00000261799 LRRC10Q5BKY1 277 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms