RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ALKAL1Q6UXT8 129 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 SERPINA9Q86WD7 417 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 CLEC10AQ8IUN9 316 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 ZDHHC21Q8IVQ6 265 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 OR2AP1Q8NGE2 309 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 OR4P4Q8NGL7 312 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 LRRN4Q8WUT4 740 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 TBX5Q99593 518 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 PITX2Q99697 317 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 MRPL45Q9BRJ2 306 aaKnown RBP7.08□□□□□ -1.28
GPNMB-201ENST00000258733 DPAGT1Q9H3H5 408 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 GSTO2Q9H4Y5 243 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 CXorf36Q9H7Y0 433 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 LMAN1LQ9HAT1 526 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 IL17RBQ9NRM6 502 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 ONECUT1Q9UBC0 465 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 CDYLQ9Y232 598 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 G3V2L1 256 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 K7EQM0 130 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 DLX3O60479 287 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 HIST1H2BKO60814 126 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 GLSO94925 669 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 OR4F21O95013 312 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 MT-CO2P00403 227 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 LCATP04180 440 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 HIST1H2BJP06899 126 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 SLC10A3P09131 477 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 MMP7P09237 267 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 GIPP09681 153 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 ZNF37AP17032 561 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 OMGP23515 440 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 HIST1H2BOP23527 126 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 CYP2F1P24903 491 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 MPGP29372 298 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 HIST1H2BBP33778 126 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 HIST1H2BDP58876 126 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 HIST1H2BCP62807 126 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 ITPK1Q13572 414 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 HIST2H2BEQ16778 126 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 DUSP28Q4G0W2 176 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 C9orf135Q5VTT2 229 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 OR4F3Q6IEY1 312 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 LINC00696Q6ZRV3 163 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 SYT13Q7L8C5 426 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 C6orf120Q7Z4R8 191 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 CD163Q86VB7 1156 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 C2orf73Q8N5S3 287 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 OR5AK3PQ8NH89 298 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 STT3BQ8TCJ2 826 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 OR8D1Q8WZ84 308 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 TFGQ92734 400 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 HIST1H2BHQ93079 126 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 ARL11Q969Q4 196 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 JSRP1Q96MG2 331 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 TSSK3Q96PN8 268 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 ZNF607Q96SK3 696 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 NKX3-1Q99801 234 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 HIST1H2BNQ99877 126 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 HIST1H2BMQ99879 126 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 WRAP53Q9BUR4 548 aaKnown RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 PLA2G12BQ9BX93 195 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 SPATC1LQ9H0A9 340 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 CDT1Q9H211 546 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 AUNIPQ9H7T9 357 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 WDR54Q9H977 334 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 SLC25A19Q9HC21 320 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 EXOSC4Q9NPD3 245 aaKnown RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 MEPEQ9NQ76 525 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 TMEM45AQ9NWC5 275 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 TAS2R14Q9NYV8 317 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 VPS29Q9UBQ0 182 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 TNFSF18Q9UNG2 199 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 NIP7Q9Y221 180 aaKnown RBP eCLIP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 ST3GAL6Q9Y274 331 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 RAP2CQ9Y3L5 183 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 CCL27Q9Y4X3 112 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 ITGB4P16144 1822 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 ZNF831Q5JPB2 1677 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 FAM183AA6NL82 134 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 LAMTOR5O43504 91 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 LDB2O43679 373 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 LANCL1O43813 399 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 SLC25A12O75746 678 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 NFATC1O95644 943 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 TGFB1P01137 390 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 OR4A8P0C604 315 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 HKR1P10072 659 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 CASRP41180 1078 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 SOX3P41225 446 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 TECP42680 631 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 OR10A3P58181 314 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 GINS1Q14691 196 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 IL17AQ16552 155 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 PHF19Q5T6S3 580 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 TMEM268Q5VZI3 342 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 OR4A47Q6IF82 309 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 DNM1P34Q6PK57 102 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 C19orf48Q6RUI8 117 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 TMEM205Q6UW68 189 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms