RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PRO3102Q9H379 93 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 WDR76Q9H967 626 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 ING4Q9UNL4 249 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 U3KQ87 197 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 FRYQ5TBA9 3013 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 LOC400499M0QZD8 3231 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 IGHV5-10-1A0A0J9YXX1 117 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 SSNA1O43805 119 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 HLA-DQB1P01920 261 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 FBXO45P0C2W1 286 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 RNF4P78317 190 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 IGLV3-21P80748 117 aaPredicted RBP13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 CDONQ4KMG0 1287 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 VASNQ6EMK4 673 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 FAAP20Q6NZ36 180 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 MZT2AQ6P582 158 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 ARSKQ6UWY0 536 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 UXS1Q8NBZ7 420 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 OR1N1Q8NGS0 311 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 ABHD4Q8TB40 342 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 IFI44Q8TCB0 444 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 THAP4Q8WY91 577 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 RFT1Q96AA3 541 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 ZC3HAV1LQ96H79 300 aaKnown RBP13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 C5orf34Q96MH7 638 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 ABHD1Q96SE0 405 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 TWSG1Q9GZX9 223 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 ERVMER34-1Q9H9K5 563 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 CHRNA9Q9UGM1 479 aa13.27□□□□□ -0.28
TRAFD1-201ENST00000257604 CEP192Q8TEP8 1941 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 TMEM131Q92545 1883 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 CDK2AP1O14519 115 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 EIF1AYO14602 144 aaKnown RBP13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 XKRYO14609 159 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 SMAD9O15198 467 aaKnown RBP13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 RGS9O75916 674 aaPredicted RBP13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 FGF9P31371 208 aaPredicted RBP13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 GDI2P50395 445 aaKnown RBP13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 NRG3P56975 720 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 FHL1Q13642 323 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 ZNF74Q16587 644 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 COL28A1Q2UY09 1125 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 RPL13AP3Q6NVV1 102 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 TRILQ7L0X0 811 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 PPP1R3BQ86XI6 285 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 SLC41A2Q96JW4 573 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 ZNF649Q9BS31 505 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 EMC6Q9BV81 110 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 MMP25Q9NPA2 562 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 ZFP64Q9NPA5 681 aa13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 EXOGQ9Y2C4 368 aaKnown RBP13.27□□□□□ -0.29
TRAFD1-201ENST00000257604 SUSD5O60279 629 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 TPPPO94811 219 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 IGKV3-11P04433 115 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 SNRPBP14678 240 aaKnown RBP13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 SLC6A1P30531 599 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 EPHA4P54764 986 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 OC90Q02509 493 aaPredicted RBP13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 LGALS3BPQ08380 585 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 TMEM44Q2T9K0 475 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 EXOSC6Q5RKV6 272 aaKnown RBP13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 GPAT4Q86UL3 456 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 PIAS4Q8N2W9 510 aaPredicted RBP13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 NPEPL1Q8NDH3 523 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 OR4D9Q8NGE8 314 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 WDR89Q96FK6 387 aaPredicted RBP13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 ZNF285Q96NJ3 590 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 OR1F2PQ96R84 312 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 MS4A7Q9GZW8 240 aaPredicted RBP13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 MMACHCQ9Y4U1 282 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 C10orf142B7Z368 130 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 OR2J2O76002 312 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 IGHA1P01876 353 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 SFTPDP35247 375 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 TALDO1P37837 337 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 OR7A5Q15622 319 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 HES5Q5TA89 166 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 RNLSQ5VYX0 342 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 PELI1Q96FA3 418 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 ARL5BQ96KC2 179 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 PELOQ9BRX2 385 aaKnown RBP13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 NPFFR2Q9Y5X5 522 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 ZFHX2Q9C0A1 2572 aaPredicted RBP13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 FITM1A5D6W6 292 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 PPM1BO75688 479 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 RGS11O94810 467 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 HLA-DOBP13765 273 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 ZNF28P17035 718 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 PRKACAP17612 351 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 GBX2P52951 348 aaPredicted RBP13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 ATG4DQ86TL0 474 aaPredicted RBP13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 COMMD7Q86VX2 200 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 OR52N1Q8NH53 320 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 PPP1R14AQ96A00 147 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 CREB3L1Q96BA8 519 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 TIMP4Q99727 224 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 COL4A2P08572 1712 aa13.26□□□□□ -0.29
TRAFD1-201ENST00000257604 SVILO95425 2214 aa13.25□□□□□ -0.29
TRAFD1-201ENST00000257604 FRG2CA6NGY1 282 aa13.25□□□□□ -0.29
TRAFD1-201ENST00000257604 SLC16A7O60669 478 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms