RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 PRSS48Q7RTY5 328 aa10.47□□□□□ -0.73
LIN28A-201ENST00000254231 SULF2Q8IWU5 870 aa10.47□□□□□ -0.73
LIN28A-201ENST00000254231 VSX1Q9NZR4 365 aaPredicted RBP10.47□□□□□ -0.73
LIN28A-201ENST00000254231 CAB39Q9Y376 341 aaPredicted RBP10.47□□□□□ -0.73
LIN28A-201ENST00000254231 IGLV3-12A0A075B6K2 115 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 TRBV2A0A0J9YWF9 115 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 K7EM74 188 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 TPOP07202 933 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 CARD18P57730 90 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 PPIAP62937 165 aaKnown RBP10.46□□□□□ -0.73
LIN28A-201ENST00000254231 CDK5Q00535 292 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 MEPCEQ7L2J0 689 aaKnown RBP10.46□□□□□ -0.73
LIN28A-201ENST00000254231 UEVLDQ8IX04 471 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 ZNF676Q8N7Q3 588 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 OR5J2Q8NH18 312 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 MCFD2Q8NI22 146 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 ELP5Q8TE02 316 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 TM9SF4Q92544 642 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 ZNF385AQ96PM9 386 aaKnown RBP10.46□□□□□ -0.73
LIN28A-201ENST00000254231 TSPAN32Q96QS1 320 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 GABARAPL1Q9H0R8 117 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 ICAM2P13598 275 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 SPI1P17947 270 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 GNALP38405 381 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 MAGEA8P43361 318 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 SLC6A8P48029 635 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 RGS6P49758 472 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 CXADRP78310 365 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.46□□□□□ -0.73
LIN28A-201ENST00000254231 KLHL22Q53GT1 634 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 KRT77Q7Z794 578 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 BHLHE23Q8NDY6 225 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 DCLRE1CQ96SD1 692 aaKnown RBP10.46□□□□□ -0.73
LIN28A-201ENST00000254231 MICU1Q9BPX6 476 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 DUSP21Q9H596 190 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 CCNB1IP1Q9NPC3 277 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 SACM1LQ9NTJ5 587 aa10.46□□□□□ -0.73
LIN28A-201ENST00000254231 USP9XQ93008 2570 aaPredicted RBP10.46□□□□□ -0.74
LIN28A-201ENST00000254231 CTDSP2O14595 271 aa10.46□□□□□ -0.74
LIN28A-201ENST00000254231 SERPINA7P05543 415 aa10.46□□□□□ -0.74
LIN28A-201ENST00000254231 SDC2P34741 201 aa10.46□□□□□ -0.74
LIN28A-201ENST00000254231 OR8H2Q8N162 312 aa10.46□□□□□ -0.74
LIN28A-201ENST00000254231 NUBPLQ8TB37 319 aa10.46□□□□□ -0.74
LIN28A-201ENST00000254231 PLGRKTQ9HBL7 147 aa10.46□□□□□ -0.74
LIN28A-201ENST00000254231 RAXQ9Y2V3 346 aa10.46□□□□□ -0.74
LIN28A-201ENST00000254231 MAS1P04201 325 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 RPS4Y1P22090 263 aaKnown RBP10.45□□□□□ -0.74
LIN28A-201ENST00000254231 DCKP27707 260 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 CBX3Q13185 183 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 IDNKQ5T6J7 187 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 HBMQ6B0K9 141 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 SERPINA12Q8IW75 414 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 ZNF440Q8IYI8 595 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 KLHL36Q8N4N3 616 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 FKBP10Q96AY3 582 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 PITX2Q99697 317 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 SSR3Q9UNL2 185 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 SLC22A13Q9Y226 551 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 NOTCH3Q9UM47 2321 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 IGKV1D-43A0A0B4J1Z2 117 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 A0A0J9YW62 118 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 BHLHE40O14503 412 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 MPZL2O60487 215 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 ZNF883P0CG24 379 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 EMP3P54852 163 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 MLF1P58340 268 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 NHLH1Q02575 133 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 IL18R1Q13478 541 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 ARHGAP11AQ6P4F7 1023 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 SLC46A3Q7Z3Q1 461 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 P4HA3Q7Z4N8 544 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 DNAAF1Q8NEP3 725 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 C17orf47Q8NEP4 570 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 TSEN15Q8WW01 171 aaKnown RBP10.45□□□□□ -0.74
LIN28A-201ENST00000254231 KCNE4Q8WWG9 221 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 THAP4Q8WY91 577 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 POP5Q969H6 163 aaKnown RBP10.45□□□□□ -0.74
LIN28A-201ENST00000254231 ZNF837Q96EG3 531 aaPredicted RBP10.45□□□□□ -0.74
LIN28A-201ENST00000254231 FER1L6-AS2Q96M78 137 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 RBP7Q96R05 134 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 AMELYQ99218 206 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 WDR54Q9H977 334 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 TIMMDC1Q9NPL8 285 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 TAS2R5Q9NYW4 299 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 SEMA5BQ9P283 1151 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 COPS3Q9UNS2 423 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 FAM25AB3EWG3 89 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 FAM25CB3EWG5 89 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 FAM25GB3EWG6 89 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 SLC2A2P11168 524 aaPredicted RBP10.45□□□□□ -0.74
LIN28A-201ENST00000254231 SELENOPP49908 381 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 HNRNPA0Q13151 305 aaKnown RBP10.45□□□□□ -0.74
LIN28A-201ENST00000254231 MESTQ5EB52 335 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 CEACAM19Q7Z692 300 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 ZNF554Q86TJ5 538 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 WDFY1Q8IWB7 410 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 CISD2Q8N5K1 135 aaKnown RBP10.45□□□□□ -0.74
LIN28A-201ENST00000254231 OR2M3Q8NG83 312 aa10.45□□□□□ -0.74
LIN28A-201ENST00000254231 TRMT61AQ96FX7 289 aaKnown RBP10.45□□□□□ -0.74
LIN28A-201ENST00000254231 AK6Q9Y3D8 172 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms