RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 GP1BBP13224 206 aa14.27□□□□□ -0.12
LRFN1-201ENST00000248668 NPR2P20594 1047 aa14.27□□□□□ -0.12
LRFN1-201ENST00000248668 ADH7P40394 386 aa14.27□□□□□ -0.12
LRFN1-201ENST00000248668 AKR1D1P51857 326 aa14.27□□□□□ -0.12
LRFN1-201ENST00000248668 FBXW4P57775 412 aa14.27□□□□□ -0.12
LRFN1-201ENST00000248668 FAPQ12884 760 aa14.27□□□□□ -0.12
LRFN1-201ENST00000248668 BIKQ13323 160 aa14.27□□□□□ -0.12
LRFN1-201ENST00000248668 MELKQ14680 651 aa14.27□□□□□ -0.12
LRFN1-201ENST00000248668 ESCO2Q56NI9 601 aa14.27□□□□□ -0.12
LRFN1-201ENST00000248668 AMELYQ99218 206 aa14.27□□□□□ -0.12
LRFN1-201ENST00000248668 MRM2Q9UI43 246 aaKnown RBP14.27□□□□□ -0.12
LRFN1-201ENST00000248668 LAMP5Q9UJQ1 280 aa14.27□□□□□ -0.12
LRFN1-201ENST00000248668 SUSD5O60279 629 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 ARL6IP5O75915 188 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 SERPINA3P01011 423 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 IL11P20809 199 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 EVI2BP34910 448 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 SHBQ15464 509 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 ETFDHQ16134 617 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 SLC43A2Q8N370 569 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 OR10AC1Q8NH08 325 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 GPR119Q8TDV5 335 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 C8orf44Q96CB5 159 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 VDAC3Q9Y277 283 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 SDK2Q58EX2 2172 aa14.27□□□□□ -0.13
LRFN1-201ENST00000248668 DOK2O60496 412 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 OPN1LWP04000 364 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 PTHLHP12272 177 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 SF3A2Q15428 464 aaKnown RBP14.26□□□□□ -0.13
LRFN1-201ENST00000248668 FAM220AQ7Z4H9 259 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 LILRB1Q8NHL6 650 aaPredicted RBP14.26□□□□□ -0.13
LRFN1-201ENST00000248668 METTL21AQ8WXB1 218 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 GPX7Q96SL4 187 aaPredicted RBP14.26□□□□□ -0.13
LRFN1-201ENST00000248668 ADAM19Q9H013 955 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 EXOSC3Q9NQT5 275 aaKnown RBP14.26□□□□□ -0.13
LRFN1-201ENST00000248668 TRIM77I1YAP6 450 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 K7ESF4 209 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 HLA-DQB1P01920 261 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 CD53P19397 219 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 SRMP19623 302 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 ARRB1P49407 418 aaPredicted RBP14.26□□□□□ -0.13
LRFN1-201ENST00000248668 MEP1BQ16820 701 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 SLC35D3Q5M8T2 416 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 COX15Q7KZN9 410 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 DNASE2BQ8WZ79 361 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 KCNJ15Q99712 375 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 TAS2R5Q9NYW4 299 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 WNT16Q9UBV4 365 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 SLC23A1Q9UHI7 598 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 KCNG2Q9UJ96 466 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 ALG1L2C9J202 215 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 UCHL1P09936 223 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 SLC6A19Q695T7 634 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 BMPERQ8N8U9 685 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 OR8H1Q8NGG4 311 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 OR51A4Q8NGJ6 313 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 GON7Q9BXV9 100 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 CHRNA10Q9GZZ6 450 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 AUNIPQ9H7T9 357 aa14.26□□□□□ -0.13
LRFN1-201ENST00000248668 TMED7-TICAM2A0A0A6YYA0 188 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 PGCP20142 388 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 RBMS1P29558 406 aaKnown RBP14.25□□□□□ -0.13
LRFN1-201ENST00000248668 STPG1Q5TH74 334 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 SLC16A9Q7RTY1 509 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 LRFN5Q96NI6 719 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 GFI1Q99684 422 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 BEX1Q9HBH7 125 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 ZNF281Q9Y2X9 895 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 TMED7Q9Y3B3 224 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 ZNF879B4DU55 563 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 INMT-MINDY4F8WBC2 141 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 XKRYO14609 159 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 RENP00797 406 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 RNF4P78317 190 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 TAGLNQ01995 201 aaKnown RBP14.25□□□□□ -0.13
LRFN1-201ENST00000248668 ACKR1Q16570 336 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 LRRN1Q6UXK5 716 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 TIGD4Q8IY51 512 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 KCTD12Q96CX2 325 aaKnown RBP14.25□□□□□ -0.13
LRFN1-201ENST00000248668 PCED1AQ9H1Q7 454 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 APMAPQ9HDC9 416 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 MCUBQ9NWR8 336 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 GLTPQ9NZD2 209 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 FRRS1LQ9P0K9 344 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 SIT1Q9Y3P8 196 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 BGLAPP02818 100 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 FAM157BP0CG42 384 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 HLA-DOBP13765 273 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 COL28A1Q2UY09 1125 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 BCL2L15Q5TBC7 163 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 PWWP2BQ6NUJ5 590 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 FAM122CQ6P4D5 195 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 EXD3Q8N9H8 876 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 OR2T4Q8NH00 348 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 ZFAND1Q8TCF1 268 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 PPP1R14AQ96A00 147 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 RNF166Q96A37 237 aaPredicted RBP14.25□□□□□ -0.13
LRFN1-201ENST00000248668 UQCC2Q9BRT2 126 aa14.25□□□□□ -0.13
LRFN1-201ENST00000248668 AKIRIN1Q9H9L7 192 aaPredicted RBP14.25□□□□□ -0.13
LRFN1-201ENST00000248668 SLC16A7O60669 478 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms