RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 TAS2R10Q9NYW0 307 aa23.15■■□□□ 1.3
RAB40C-201ENST00000248139 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.15■■□□□ 1.3
RAB40C-201ENST00000248139 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.15■■□□□ 1.3
RAB40C-201ENST00000248139 HRGP04196 525 aa23.15■■□□□ 1.3
RAB40C-201ENST00000248139 MYF5P13349 255 aa23.15■■□□□ 1.3
RAB40C-201ENST00000248139 TAS2R20P59543 309 aa23.15■■□□□ 1.3
RAB40C-201ENST00000248139 RPL6Q02878 288 aaKnown RBP23.15■■□□□ 1.3
RAB40C-201ENST00000248139 BAIAP2L2Q6UXY1 529 aa23.15■■□□□ 1.3
RAB40C-201ENST00000248139 C8orf33Q9H7E9 229 aaPredicted RBP23.15■■□□□ 1.3
RAB40C-201ENST00000248139 ANXA2P2A6NMY6 339 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 C10orf142B7Z368 130 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 IL33O95760 270 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 ANXA2P07355 339 aaKnown RBP23.14■■□□□ 1.29
RAB40C-201ENST00000248139 CCR5P51681 352 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 NR0B1P51843 470 aaKnown RBP23.14■■□□□ 1.29
RAB40C-201ENST00000248139 ART1P52961 327 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 BLVRAP53004 296 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 SLC25A1P53007 311 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 ISXQ2M1V0 245 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 ELMOD2Q8IZ81 293 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 GPR27Q9NS67 375 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 OR4C45A6NMZ5 311 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 TPOP07202 933 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 ZNF782Q6ZMW2 699 aaPredicted RBP23.14■■□□□ 1.29
RAB40C-201ENST00000248139 SHISA6Q6ZSJ9 500 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 OR51D1Q8NGF3 324 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 C7orf50Q9BRJ6 194 aaKnown RBP23.14■■□□□ 1.29
RAB40C-201ENST00000248139 NUDT9Q9BW91 350 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 PDE7BQ9NP56 450 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 PPIEQ9UNP9 301 aaKnown RBP23.14■■□□□ 1.29
RAB40C-201ENST00000248139 SLC22A13Q9Y226 551 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 COL4A2P08572 1712 aa23.14■■□□□ 1.29
RAB40C-201ENST00000248139 CIB4A0PJX0 185 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 HIST1H2ABP04908 130 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 ALOX5APP20292 161 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 GUCA2AQ02747 115 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 FAM209AQ5JX71 171 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 SLC6A19Q695T7 634 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 HIST3H2AQ7L7L0 130 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 MDGA2Q7Z553 956 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 ZNF440Q8IYI8 595 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 KDM8Q8N371 416 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 FTMTQ8N4E7 242 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 HIST1H2ACQ93077 130 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 HAVCR1Q96D42 359 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 ZNF69Q9UC07 566 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 SPAG17Q6Q759 2223 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 PPICP45877 212 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 CBFBQ13951 182 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 MEP1BQ16820 701 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 RFPL4BQ6ZWI9 263 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 SLITRK2Q9H156 845 aa23.13■■□□□ 1.29
RAB40C-201ENST00000248139 ALDOBP05062 364 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 FREM3P0C091 2139 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 UBE2MP61081 183 aaKnown RBP23.12■■□□□ 1.29
RAB40C-201ENST00000248139 OC90Q02509 493 aaPredicted RBP23.12■■□□□ 1.29
RAB40C-201ENST00000248139 DMWDQ09019 674 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 C19orf57Q0VDD7 668 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 C1orf189Q5VU69 101 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 OR5M10Q6IEU7 315 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 FGD2Q7Z6J4 655 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 BIVMQ86UB2 503 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 OR4D10Q8NGI6 311 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 TAS2R5Q9NYW4 299 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 WNT11O96014 354 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 KIR3DL2P43630 455 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 C16orf47Q6ZP98 133 aaPredicted RBP23.12■■□□□ 1.29
RAB40C-201ENST00000248139 PHYHIPQ92561 330 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 LCORQ96JN0 433 aaPredicted RBP23.12■■□□□ 1.29
RAB40C-201ENST00000248139 SORCS2Q96PQ0 1159 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 MESP1Q9BRJ9 268 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 PLEKHA1Q9HB21 404 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 MGAT4CQ9UBM8 478 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 MOKQ9UQ07 419 aa23.12■■□□□ 1.29
RAB40C-201ENST00000248139 ANKRD20A5PA0PJZ0 165 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 KDM4BO94953 1096 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 CXCR1P25024 350 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 EXOSC2Q13868 293 aaKnown RBP23.11■■□□□ 1.29
RAB40C-201ENST00000248139 WDR38Q5JTN6 314 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 MIB2Q96AX9 1013 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 NXPE2Q96DL1 559 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 ACTR6Q9GZN1 396 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 CUTCQ9NTM9 273 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 SERTAD2Q14140 314 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 NHLRC1Q6VVB1 395 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 HGDQ93099 445 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 ADIPOR1Q96A54 375 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 INTS14Q96SY0 518 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 B3GNT2Q9NY97 397 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 SCP2D1Q9UJQ7 156 aa23.11■■□□□ 1.29
RAB40C-201ENST00000248139 C2orf72A6NCS6 295 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 TMEM150CB9EJG8 249 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 RENP00797 406 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 CCKBRP32239 447 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 RORAP35398 523 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 FASLGP48023 281 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 FAM69AQ5T7M9 428 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 ZNF578Q96N58 590 aaPredicted RBP23.1■■□□□ 1.29
RAB40C-201ENST00000248139 OR11A1Q9GZK7 315 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 ELOVL3Q9HB03 270 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms