RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 GLULP15104 373 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 C5AR1P21730 350 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 FNTBP49356 437 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 TPMTP51580 245 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 MRPS10P82664 201 aaKnown RBP11.27□□□□□ -0.61
NUP88-201ENST00000225696 ERV3-1Q14264 604 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 LY6G6FQ5SQ64 297 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 ASPHD2Q6ICH7 369 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 ZCCHC12Q6PEW1 402 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 TSSK4Q6SA08 328 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 FAM122BQ7Z309 247 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 PDZD9Q8IXQ8 264 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 EXD3Q8N9H8 876 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 BOLLQ8N9W6 283 aaKnown RBP11.27□□□□□ -0.61
NUP88-201ENST00000225696 TNFAIP8L1Q8WVP5 186 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 C3orf49Q96BT1 292 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 ZFYVE21Q9BQ24 234 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 MFFQ9GZY8 342 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 LMAN2LQ9H0V9 348 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 ACTR10Q9NZ32 417 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 IKZF2Q9UKS7 526 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 CFAP54Q96N23 3096 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 UBE2QL1A1L167 161 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 D6RAR5 112 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 DNASE2O00115 360 aaPredicted RBP11.26□□□□□ -0.61
NUP88-201ENST00000225696 OR10H2O60403 315 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 AK1P00568 194 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 FCARP24071 287 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 MNDAP41218 407 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 DEFB110Q30KQ9 67 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 C4orf46Q504U0 113 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 SLC35D3Q5M8T2 416 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 TMEM205Q6UW68 189 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 RNF44Q7L0R7 432 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 DPY19L4Q7Z388 723 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 ZNF761Q86XN6 746 aaPredicted RBP11.26□□□□□ -0.61
NUP88-201ENST00000225696 NAXDQ8IW45 347 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 CAMKVQ8NCB2 501 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 LSM14AQ8ND56 463 aaKnown RBP11.26□□□□□ -0.61
NUP88-201ENST00000225696 OR9A4Q8NGU2 314 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 OR6N1Q8NGY5 312 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 HOXB13Q92826 284 aaPredicted RBP11.26□□□□□ -0.61
NUP88-201ENST00000225696 SCARF2Q96GP6 870 aaPredicted RBP11.26□□□□□ -0.61
NUP88-201ENST00000225696 SLC38A3Q99624 504 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 RABL2AQ9UBK7 228 aaPredicted RBP11.26□□□□□ -0.61
NUP88-201ENST00000225696 RABL2BQ9UNT1 228 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 ZNF337Q9Y3M9 751 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 HEBP2Q9Y5Z4 205 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 NPIPB9F8W1W9 429 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 LDOC1O95751 146 aaPredicted RBP11.26□□□□□ -0.61
NUP88-201ENST00000225696 CSTAP01040 98 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 IL32P24001 234 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 POU3F4P49335 361 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 TMEM31Q5JXX7 168 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 ANKRD16Q6P6B7 361 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 C11orf88Q6PI97 169 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 SLC16A9Q7RTY1 509 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 HSD17B13Q7Z5P4 300 aaPredicted RBP11.26□□□□□ -0.61
NUP88-201ENST00000225696 OR2G2Q8NGZ5 317 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 ST8SIA2Q92186 375 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 VSTM2LQ96N03 204 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 LRFN5Q96NI6 719 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 ELF4Q99607 663 aaPredicted RBP11.26□□□□□ -0.61
NUP88-201ENST00000225696 POFUT1Q9H488 388 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 IFT46Q9NQC8 304 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 MED11Q9P086 117 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 STEAP1Q9UHE8 339 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 MRTO4Q9UKD2 239 aaKnown RBP11.26□□□□□ -0.61
NUP88-201ENST00000225696 FBXO4Q9UKT5 387 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 ETV7Q9Y603 341 aa11.26□□□□□ -0.61
NUP88-201ENST00000225696 TRBV5-7A0A0A0MS05 114 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 URADA6NGE7 173 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 PCP4L1A6NKN8 68 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 ADH1BP00325 375 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 EGFP01133 1207 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 MYOGP15173 224 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 KIR3DL2P43630 455 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 TFF2Q03403 129 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 RUNX3Q13761 415 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 KIR2DS3Q14952 304 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 BEX5Q5H9J7 111 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 C10orf53Q8N6V4 93 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 ZNF676Q8N7Q3 588 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 FRMD1Q8N878 549 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 LRRC75AQ8NAA5 344 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 RELTQ969Z4 430 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 RERGQ96A58 199 aaPredicted RBP11.25□□□□□ -0.61
NUP88-201ENST00000225696 SLITRK2Q9H156 845 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 EXO5Q9H790 373 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 ZMAT3Q9HA38 289 aaKnown RBP11.25□□□□□ -0.61
NUP88-201ENST00000225696 APMAPQ9HDC9 416 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 PRDM9Q9NQV7 894 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 MYEF2Q9P2K5 600 aaKnown RBP11.25□□□□□ -0.61
NUP88-201ENST00000225696 C2orf16Q68DN1 1984 aa11.25□□□□□ -0.61
NUP88-201ENST00000225696 PRUNE2Q8WUY3 3088 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 C17orf51A8MQB3 221 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 M0QYG6 137 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 GMFGO60234 142 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 WISP1O95388 367 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 CT45A8P0DMV1 189 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms