RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ZSCAN1Q8NBB4 408 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 HMGB4Q8WW32 186 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 RBPMSQ93062 196 aaKnown RBP12.08□□□□□ -0.48
SRP54-201ENST00000216774 MCHR2Q969V1 340 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 TMEM106AQ96A25 262 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 MSANTD3Q96H12 275 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 CCDC120Q96HB5 630 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 TSPAN32Q96QS1 320 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 REV3LO60673 3130 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 GGT3PA6NGU5 568 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 MCRIP1C9JLW8 97 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 SCDO00767 359 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 ZNF264O43296 627 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 OIP5O43482 229 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 AKR7A3O95154 331 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 SEMA4FO95754 770 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 IL33O95760 270 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 MAS1P04201 325 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 F13BP05160 661 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 TMIGD3P0DMS9 266 aaPredicted RBP12.07□□□□□ -0.48
SRP54-201ENST00000216774 DRD1P21728 446 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 CCR4P51679 360 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 EIF2B5Q13144 721 aaKnown RBP12.07□□□□□ -0.48
SRP54-201ENST00000216774 BIKQ13323 160 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 GRM7Q14831 915 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 PCGF3Q3KNV8 242 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 FDX2Q6P4F2 183 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 TMEM65Q6PI78 240 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 SLC36A1Q7Z2H8 476 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 KANSL1Q7Z3B3 1105 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 SIX5Q8N196 739 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 SPERTQ8NA61 448 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 GATSQ8NAP1 163 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 OR6N2Q8NGY6 317 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 PHOSPHO1Q8TCT1 267 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 PNPLA2Q96AD5 504 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 TOE1Q96GM8 510 aaKnown RBP12.07□□□□□ -0.48
SRP54-201ENST00000216774 TCTN2Q96GX1 697 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 MED9Q9NWA0 146 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 ZNF224Q9NZL3 707 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 YBX2Q9Y2T7 364 aaKnown RBP12.07□□□□□ -0.48
SRP54-201ENST00000216774 SPTY2D1-AS1A0A0U1RR47 76 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 TVP23AA6NH52 213 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 HMSDA8MTL9 139 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 PYCARD-AS1I3L0S3 204 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 RGS11O94810 467 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 HIST1H2ABP04908 130 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 MST1P26927 711 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
SRP54-201ENST00000216774 DMWDQ09019 674 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 BAMBIQ13145 260 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 TMEM92Q6UXU6 159 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 HIST3H2AQ7L7L0 130 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 GLRX5Q86SX6 157 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 GPAT4Q86UL3 456 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 C7orf61Q8IZ16 206 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 OR6N1Q8NGY5 312 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 PCNPQ8WW12 178 aaKnown RBP12.07□□□□□ -0.48
SRP54-201ENST00000216774 HIST1H2ACQ93077 130 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 C4orf45Q96LM5 186 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 DCBLD2Q96PD2 775 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 INTS14Q96SY0 518 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 FKRPQ9H9S5 495 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 RDH8Q9NYR8 311 aa12.07□□□□□ -0.48
SRP54-201ENST00000216774 ING1Q9UK53 422 aaPredicted RBP12.07□□□□□ -0.48
SRP54-201ENST00000216774 HEATR5AQ86XA9 2040 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 EML5Q05BV3 1969 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 OR2W5A6NFC9 320 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 TTLL8A6PVC2 850 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 CTAG2O75638 210 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 HRGP04196 525 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 CTSEP14091 401 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 SEC61A1P61619 476 aaKnown RBP12.06□□□□□ -0.48
SRP54-201ENST00000216774 SSBP1Q04837 148 aaKnown RBP12.06□□□□□ -0.48
SRP54-201ENST00000216774 ZNF542PQ5EBM4 170 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 B3GNTL1Q67FW5 361 aaPredicted RBP12.06□□□□□ -0.48
SRP54-201ENST00000216774 OR5M10Q6IEU7 315 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 CBLN3Q6UW01 205 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 DPY19L4Q7Z388 723 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 PRSS35Q8N3Z0 413 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 OR4C16Q8NGL9 310 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 ASB13Q8WXK3 278 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 KTI12Q96EK9 354 aaPredicted RBP12.06□□□□□ -0.48
SRP54-201ENST00000216774 ZNF285Q96NJ3 590 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 LMF1Q96S06 567 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 SLC17A5Q9NRA2 495 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 OPN4Q9UHM6 478 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 GMEB2Q9UKD1 530 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 CDV3Q9UKY7 258 aaKnown RBP12.06□□□□□ -0.48
SRP54-201ENST00000216774 CACNA1IQ9P0X4 2223 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 A0A1B0GTH9 108 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 hCG_1807616A0A1W2PRN6 198 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 TCRBV21S2A2A0A5A6 115 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 H7C1C5 153 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 UTS2O95399 124 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 IGHV4-34P06331 123 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 VSIG10L2P0DP72 767 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 CSF2RBP32927 897 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 PPICP45877 212 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 SLC6A8P48029 635 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms