RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 RAP1AP62834 184 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 DGUOKQ16854 277 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 C3orf33Q6P1S2 294 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 NIPAL3Q6P499 406 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 MRGPRGQ86SM5 289 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 GALNT16Q8N428 558 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 FADS6Q8N9I5 356 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 FAM98AQ8NCA5 519 aaKnown RBP15.48■□□□□ 0.07
PHGDH-234ENST00000642041 OR5M3Q8NGP4 307 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 OR2T4Q8NH00 348 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 C14orf79Q96F83 325 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 TEAD3Q99594 435 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 AASSQ9UDR5 926 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 TRAPPC4Q9Y296 219 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 A3GALT2U3KPV4 340 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 XKRYO14609 159 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 AIREO43918 545 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 NTN1O95631 604 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 BGLAPP02818 100 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 OR2T7P0C7T2 308 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 ZNF17P17021 662 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 RNF144AP50876 292 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-234ENST00000642041 EGR4Q05215 589 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 SELENBP1Q13228 472 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 GGTLC2Q14390 218 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 PLBD1Q6P4A8 553 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 USP43Q70EL4 1123 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 KCTD20Q7Z5Y7 419 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 CLEC1AQ8NC01 280 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 SLC37A3Q8NCC5 494 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 OR2T27Q8NH04 317 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 HINT3Q9NQE9 182 aaKnown RBP15.47■□□□□ 0.07
PHGDH-234ENST00000642041 INIPQ9NRY2 104 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 IER3IP1Q9Y5U9 82 aa15.47■□□□□ 0.07
PHGDH-234ENST00000642041 CHCHD2Q9Y6H1 151 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-234ENST00000642041 EXPH5Q8NEV8 1989 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 A0A1W2PRG6 482 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 HSPB2A8KAH6 182 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 BLOC1S5-TXNDC5H3BN57 136 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 PHYHO14832 338 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 OIP5O43482 229 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 DNPH1O43598 174 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 PPP1R3DO95685 299 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 IGHMP01871 453 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 GAAP10253 952 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 IDUAP35475 653 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 SOX3P41225 446 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 MAP2K4P45985 399 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 CYB561P49447 251 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 DAP3P51398 398 aaKnown RBP15.46■□□□□ 0.07
PHGDH-234ENST00000642041 CTXN1P60606 82 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 RPS7P62081 194 aaKnown RBP15.46■□□□□ 0.07
PHGDH-234ENST00000642041 ACTA2P62736 377 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 ACTG2P63267 376 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 PIGFQ07326 219 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 FHL1Q13642 323 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 HSPB2Q16082 182 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 IL20RBQ6UXL0 311 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 AMER2Q8N7J2 671 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 OR2M3Q8NG83 312 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 OR10G3Q8NGC4 313 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 OR52E2Q8NGJ4 325 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 NTNG2Q96CW9 530 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 SLX1AQ9BQ83 275 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 SH2D2AQ9NP31 389 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 TMEM14AQ9Y6G1 99 aa15.46■□□□□ 0.07
PHGDH-234ENST00000642041 SNPHO15079 494 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 EIF1BO60739 113 aaKnown RBP15.45■□□□□ 0.06
PHGDH-234ENST00000642041 CPEP16870 476 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 MST1P26927 711 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 SOX8P57073 446 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 TPBGQ13641 420 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 DCAF10Q5QP82 559 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 DNM1P34Q6PK57 102 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 RPTNQ6XPR3 784 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 THSD4Q6ZMP0 1018 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 H1FNTQ75WM6 255 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-234ENST00000642041 OR1J4Q8NGS1 313 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 UFD1Q92890 307 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 PTP4A1Q93096 173 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 TAAR8Q969N4 342 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 C1GALT1C1Q96EU7 318 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 CCDC120Q96HB5 630 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 LIN28AQ9H9Z2 209 aaKnown RBP15.45■□□□□ 0.06
PHGDH-234ENST00000642041 ALKBH4Q9NXW9 302 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 GSTK1Q9Y2Q3 226 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 GPR52Q9Y2T5 361 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 CSAG2Q9Y5P2 127 aa15.45■□□□□ 0.06
PHGDH-234ENST00000642041 LOC102725191A0A1B0GVB3 256 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 TMEM72A0PK05 275 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 FAM221AA4D161 298 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 GLCEO94923 617 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 VAMP5O95183 116 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 PTHP01270 115 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 LCKP06239 509 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 SBK2P0C263 348 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 SLC2A5P22732 501 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 CRABP1P29762 137 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 PTGDSP41222 190 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 RPS5P46782 204 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms