RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 TIGARQ9NQ88 270 aa6.52□□□□□ -1.37
PHGDH-225ENST00000641720 YAE1D1Q9NRH1 226 aa6.52□□□□□ -1.37
PHGDH-225ENST00000641720 PAQR5Q9NXK6 330 aaPredicted RBP6.52□□□□□ -1.37
PHGDH-225ENST00000641720 ZNF226Q9NYT6 803 aa6.52□□□□□ -1.37
PHGDH-225ENST00000641720 B3GAT1Q9P2W7 334 aa6.52□□□□□ -1.37
PHGDH-225ENST00000641720 MCTS1Q9ULC4 181 aaKnown RBP6.52□□□□□ -1.37
PHGDH-225ENST00000641720 TRAPPC4Q9Y296 219 aa6.52□□□□□ -1.37
PHGDH-225ENST00000641720 FAM32AQ9Y421 112 aaKnown RBP6.52□□□□□ -1.37
PHGDH-225ENST00000641720 LYVE1Q9Y5Y7 322 aa6.52□□□□□ -1.37
PHGDH-225ENST00000641720 IGHV4-30-2A0A087WSY4 118 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 SH3PXD2BA1X283 911 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 H3BNX3 289 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 CDC42EP2O14613 210 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 TIPRLO75663 272 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 OR7A10O76100 309 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 GADD45GO95257 159 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 CH25HO95992 272 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 IFI30P13284 250 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 MAKP20794 623 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 FKBP2P26885 142 aaKnown RBP6.51□□□□□ -1.37
PHGDH-225ENST00000641720 SLC16A1P53985 500 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 CTBP2P56545 445 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 ACTR3P61158 418 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 FHL1Q13642 323 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 ETFDHQ16134 617 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 EXOC3L2Q2M3D2 409 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 BEX5Q5H9J7 111 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 OTUD3Q5T2D3 398 aaPredicted RBP6.51□□□□□ -1.37
PHGDH-225ENST00000641720 OR2T5Q6IEZ7 315 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 TTC33Q6PID6 262 aaPredicted RBP6.51□□□□□ -1.37
PHGDH-225ENST00000641720 C5orf46Q6UWT4 87 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 STAC2Q6ZMT1 411 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 ZNF730Q6ZMV8 503 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 MBOAT2Q6ZWT7 520 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 TMEM179BQ7Z7N9 219 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 WDFY1Q8IWB7 410 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 TUSC5Q8IXB3 177 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 KDM8Q8N371 416 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 ZNF610Q8N9Z0 462 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 PAPD5Q8NDF8 572 aaKnown RBP6.51□□□□□ -1.37
PHGDH-225ENST00000641720 OR10H5Q8NGA6 315 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 OR4K5Q8NGD3 323 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 OR9K2Q8NGE7 335 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 OR13C2Q8NGS9 318 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 OR2T29Q8NH02 315 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 OR6S1Q8NH40 331 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 MOSPD2Q8NHP6 518 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 PIGXQ8TBF5 258 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 NEUROG1Q92886 237 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 ZNF775Q96BV0 537 aaPredicted RBP6.51□□□□□ -1.37
PHGDH-225ENST00000641720 ZHX1-C8orf76Q96EF9 292 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 ZC3HAV1LQ96H79 300 aaKnown RBP6.51□□□□□ -1.37
PHGDH-225ENST00000641720 FAM46AQ96IP4 442 aaKnown RBP6.51□□□□□ -1.37
PHGDH-225ENST00000641720 ZNF347Q96SE7 839 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 EPYCQ99645 322 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 GPA33Q99795 319 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 TAPBPLQ9BX59 468 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 PRRG4Q9BZD6 226 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 FKRPQ9H9S5 495 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 ELOVL5Q9NYP7 299 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 MED31Q9Y3C7 131 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 MAGED1Q9Y5V3 778 aaPredicted RBP6.51□□□□□ -1.37
PHGDH-225ENST00000641720 NBEAL2Q6ZNJ1 2754 aa6.51□□□□□ -1.37
PHGDH-225ENST00000641720 IGKV3D-15A0A087WSY6 115 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 C16orf97H3BN30 126 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 TNFRSF11BO00300 401 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 PLPP3O14495 311 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 TRAF3IP2O43734 574 aaPredicted RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 OR2T1O43869 369 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 EIF1BO60739 113 aaKnown RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 ENTPD5O75356 428 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 PLGP00747 810 aaPredicted RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 MT-ATP6P00846 226 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 IGF2P01344 180 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 ASAH2BP0C7U1 165 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 UMPSP11172 480 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 HLA-DOBP13765 273 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 POU2F1P14859 743 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 ZNF26P17031 533 aaPredicted RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 IGFBP5P24593 272 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 GTF2E2P29084 291 aaKnown RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 IFNA8P32881 189 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 NTF4P34130 210 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 CDKN1AP38936 164 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 OMPP47874 163 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 RPS4XP62701 263 aaKnown RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 PRKCDQ05655 676 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 RUNX1T1Q06455 604 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 RASGEF1BQ0VAM2 473 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 SLC17A1Q14916 467 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 RNPS1Q15287 305 aaKnown RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 TMEM249Q2WGJ8 235 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 EEF1A1P5Q5VTE0 462 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 ANKRD34AQ69YU3 496 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 OR2A2Q6IF42 318 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 ZNF770Q6IQ21 691 aaPredicted RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 PGBD2Q6P3X8 592 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 NUFIP2Q7Z417 695 aaKnown RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 NANOGNBQ7Z5D8 188 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 DTX2Q86UW9 622 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms